Factsheet for HORVU1Hr1G052760.2

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plastid

Predictor Summary:

plastid 2
mitochondrion 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion, plastid
Any Predictor:	mitochondrion, plastid
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
TargetP:	plastid
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1D01G208700.1	Wheat	mitochondrion	93.95	96.77
TraesCS1A01G205400.1	Wheat	mitochondrion	93.32	96.34
TraesCS1B01G219000.1	Wheat	mitochondrion	93.95	96.15
Zm00001d047388_P001	Maize	mitochondrion, plastid	79.54	80.04
EER91996	Sorghum	mitochondrion	79.54	79.71
Zm00001d029808_P001	Maize	mitochondrion, plastid	78.29	78.78
GSMUA_Achr4P29320_001	Banana	cytosol, peroxisome, plasma membrane	57.83	73.09
Solyc01g103890.2.1	Tomato	nucleus	58.46	64.81
PGSC0003DMT400064171	Potato	nucleus	58.25	64.58
VIT_12s0034g02550.t01	Wine grape	plastid	60.75	64.24
KRH59146	Soybean	plastid	59.92	63.64
KRH43038	Soybean	plastid	58.87	62.67
CDX99295	Canola	cytosol, mitochondrion, nucleus, plastid	54.28	62.05
CDX92290	Canola	cytosol, mitochondrion, nucleus, plastid	54.07	61.67
Bra022373.1-P	Field mustard	cytosol, mitochondrion, nucleus, plastid	54.07	61.67
AT3G58970.1	Thale cress	mitochondrion, plastid	55.95	61.47
CDY65607	Canola	plastid	54.7	61.07
CDY49260	Canola	plastid	54.7	61.07
Bra007423.1-P	Field mustard	plastid	54.7	61.07
CDY33715	Canola	cytosol	38.0	49.06
CDY39718	Canola	cytosol	38.2	48.41
AT4G28580.1	Thale cress	mitochondrion, plastid	41.13	48.28
HORVU5Hr1G094250.1	Barley	plastid	36.74	45.36
Bra032683.1-P	Field mustard	plastid	32.36	45.19
HORVU2Hr1G086400.6	Barley	cytosol	23.59	37.42
HORVU7Hr1G113400.9	Barley	plastid	33.19	36.05
HORVU3Hr1G082870.5	Barley	mitochondrion	30.27	35.71
HORVU3Hr1G082880.2	Barley	cytosol, mitochondrion, peroxisome, vacuole	29.85	34.13
HORVU3Hr1G092200.1	Barley	mitochondrion	29.85	31.92
HORVU4Hr1G004120.2	Barley	plastid	16.28	18.01

Protein Annotations

EnsemblPlants:HORVU1Hr1G052760.2	EnsemblPlantsGene:HORVU1Hr1G052760	Gene3D:1.20.58.340	Gene3D:2.40.128.330	GO:GO:0005575	GO:GO:0016020
GO:GO:0016021	ncoils:Coil	PANTHER:PTHR13890	PANTHER:PTHR13890:SF2	SEG:seg	TMHMM:TMhelix
UniParc:UPI000B4800DB	UniProt:A0A287FL55	MapMan:24.3.3.1	:	:	:

Description

No Description!

Coordinates

chrchr1H:+:390690979..390693708

Molecular Weight (calculated)

52073.6 Da

IEP (calculated)

7.286

GRAVY (calculated)

-0.149

Length

479 amino acids

Sequence
(BLAST)

001: SKPPPLAAAT MGRRSGGRKL PFFSAASTSS STKRTRSARR LPSLPKPSSP PPPSPTTPPP APQATPSPPA PSPGGGGAAP AAVSGKVGKK KAGARLWMRL
101: DRWGSSEILE LDKASIIRRA GVPPRDLRIL GPVFSHSSSI LAREKAMVIN LEFIRAIVTA EEVLLLDPLM QEVLPFVDQL RQHLPLRSLV GGNGEHGGDG
201: NGGKQDGSPG DQVPCLNEAT GAEHELPFEF QVLEVGLEAV CSTLDSSVAH LERHAIPVLD ELTKNVSTKN LERVRSLKSN LTRLLARVQK VRDEIEHLLD
301: DNEDMAHLYL TRKQAQNQQV EAIMTSAASN SIVPVGASLP RLNSSFRRSV SIATSIYLDN DVEDLEMLLE AYFMQLDGIR NRILSVREYI DDTEDYVNIQ
401: LDNQRNELIQ LQLTLTIASF GIAINTFIVG AFAMNIPCHL YDIADGSFFW PFVGGTSSGC FVISVILLGY AWWKKLLGP

Best Arabidopsis Sequence Match ( AT3G58970.1 )
(BLAST)

001: MGKGPLSFRR LSSIRHRKKG SAVKDDSAQT STPSSPPPPL PIHAGGSAVG ATGKAKKKTG GARLWMRFDR TGAMEVVECD KSTIIKRASV PARDLRILGP
101: VFSHSSNILA REKAIVVNLE VIKAIVTAEE VLLLDPLRPE VLPFVERLKQ QFPQRNGNEN ALQASANVQS PLDPEAAEGL QSELPFEFQV LEIALEVVCS
201: FVDKSVAALE TEAWPVLDEL TKNVSTENLE YVRSLKSNLT RLLARVQKVR DELEHLLDDN EDMADLYLTR KWIQNQQTEA ILAGTASNSI ALPAHNTSNL
301: HRLTSNRSAS MVTSNTEEDD VEDLEMLLEA YFMQLDGMRN KILTVREYID DTEDYVNIQL DNQRNELIQL QLTLTIASFA IAAETLLASL FGMNIPCPLY
401: SIHGVFGYFV WSVTALCIVL FMVTLGYARW KKLLGS

Arabidopsis Description

MRS2-4MRS2-4 [Source:UniProtKB/TrEMBL;Acc:A0A178VB54]
SUBAcon: [mitochondrion,plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.