Factsheet for HORVU2Hr1G086400.6

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
MultiLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2D01G354900.2	Wheat	cytosol, nucleus, plasma membrane	95.7	67.52
TraesCS2B01G375200.1	Wheat	cytosol, peroxisome, plasma membrane	95.36	67.29
TraesCS2A01G354100.1	Wheat	cytosol, peroxisome, plasma membrane	94.7	66.82
VIT_09s0018g00570.t01	Wine grape	nucleus	47.02	60.68
EES11075	Sorghum	cytosol, peroxisome, plasma membrane	87.75	60.09
Bra008431.1-P	Field mustard	plasma membrane	72.52	59.03
Zm00001d003125_P001	Maize	cytosol, nucleus, plasma membrane, plastid	87.75	58.89
Bra035144.1-P	Field mustard	cytosol, peroxisome, plasma membrane	73.18	53.9
CDX87352	Canola	cytosol, peroxisome, plasma membrane	72.85	53.66
CDX88569	Canola	cytosol, peroxisome, plasma membrane	72.52	53.41
GSMUA_Achr9P13370_001	Banana	mitochondrion	72.85	51.52
CDY35061	Canola	plastid	70.2	50.48
GSMUA_Achr10P...	Banana	mitochondrion	71.19	50.35
CDY22292	Canola	plastid	67.22	50.12
AT1G80900.1	Thale cress	cytosol, nucleus, peroxisome, plastid	73.51	50.11
PGSC0003DMT400073310	Potato	nucleus, peroxisome, plasma membrane, plastid	73.84	50.11
CDY49735	Canola	mitochondrion, peroxisome, plasma membrane, plastid	67.22	50.0
HORVU7Hr1G113400.9	Barley	plastid	72.52	49.66
AT1G16010.2	Thale cress	plastid	72.52	49.55
KRH23679	Soybean	plastid	72.19	49.21
CDY33361	Canola	plastid	67.88	49.04
Bra026085.1-P	Field mustard	plastid	72.19	48.99
KRH09638	Soybean	plastid	71.85	48.98
Solyc06g068490.2.1	Tomato	plastid	73.84	48.37
Os04t0501100-00	Rice	cytosol, plasma membrane	28.48	38.22
HORVU5Hr1G094250.1	Barley	plastid	42.72	33.25
HORVU3Hr1G092200.1	Barley	mitochondrion	42.72	28.79
HORVU3Hr1G082870.5	Barley	mitochondrion	38.08	28.33
HORVU3Hr1G082880.2	Barley	cytosol, mitochondrion, peroxisome, vacuole	36.76	26.49
HORVU1Hr1G052760.2	Barley	mitochondrion, plastid	37.42	23.59
HORVU4Hr1G004120.2	Barley	plastid	21.52	15.01

Protein Annotations

Gene3D:1.20.58.340	MapMan:24.3.3.1	UniProt:A0A287ISF9	ncoils:Coil	GO:GO:0003674	GO:GO:0005215
GO:GO:0005575	GO:GO:0006810	GO:GO:0008150	GO:GO:0016020	GO:GO:0016021	GO:GO:0030001
GO:GO:0046873	GO:GO:0055085	EnsemblPlantsGene:HORVU2Hr1G086400	EnsemblPlants:HORVU2Hr1G086400.6	InterPro:MgTranspt_CorA/ZnTranspt_ZntB	PFAM:PF01544
PANTHER:PTHR13890	PANTHER:PTHR13890:SF10	SUPFAM:SSF144083	TMHMM:TMhelix	UniParc:UPI000B4789B0	SEG:seg

Description

No Description!

Coordinates

chrchr2H:-:622994921..622998222

Molecular Weight (calculated)

34139.0 Da

IEP (calculated)

4.412

GRAVY (calculated)

0.007

Length

302 amino acids

Sequence
(BLAST)

001: PPDSYAVFCX EEAVRRYVDE LQRRLVDRAD DLPFEFIALE VALEAACSFL DAQAVELEAE AYPLLDELTA KISTLDLERA RRLKSKLVAL TRRVQKVRDE
101: IEQLMDDDGD MAEMYLTEKK MRMEASSLDE DGLQGIVGNN VFATSASAPV SPVSSPPAPR RLEKQFSFAR SRHSSFKSSE SSQYNIEELE MLLEAYFVVI
201: DYTLSKLTSL KEYIDDTEDF INIQLDNVRN QLIQFELLLT TATFVVAIFG VVSGVFGMNF EGVGVLKMPH AFEWTLVITG VCGAVIFACL LWYFKKRRFF
301: PL

Best Arabidopsis Sequence Match ( AT1G16010.1 )
(BLAST)

001: MSELKERLLP PRPASAMNLR DASVTRPSAS GRPPLLGVDV LGLKKRGQGL RSWIRVDTSG NTQVMEVDKF TMMRRCDLPA RDLRLLDPLF VYPSTILGRE
101: KAIVVNLEQI RCIITADEVL LLNSLDNYVL RYVVELQQRL KTSSVGEMWQ QENSQLSRRR SRSFDNAFEN SSPDYLPFEF RALEIALEAA CTFLDSQASE
201: LEIEAYPLLD ELTSKISTLN LERVRRLKSR LVALTRRVQK VRDEIEQLMD DDGDMAEMYL TEKKRRMEGS MYGDQSLLGY RSNDGLSVSA PVSPVSSPPD
301: SRRLDKSLSI ARSRHDSARS SEGAENIEEL EMLLEAYFVV IDSTLNKLTS LKEYIDDTED FINIQLDNVR NQLIQFELLL TTATFVVAIF GVVAGIFGMN
401: FEIDFFNQPG AFRWVLIITG VCGFVIFSAF VWFFKYRRLM PL

Arabidopsis Description

MRS2-1Magnesium transporter MRS2-1 [Source:UniProtKB/Swiss-Prot;Acc:Q9S9N4]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.