Factsheet for HORVU4Hr1G004120.2

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 8
cytosol 2
nucleus 1
vacuole 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, nucleus, plastid, vacuole
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	cytosol
Plant-mPloc:	cytosol, nucleus, plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	vacuole

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4D01G025300.1	Wheat	plastid	94.69	91.72
TraesCS4A01G286400.1	Wheat	plastid	94.46	91.29
TraesCS4B01G027800.1	Wheat	plastid	93.53	90.4
OQU91190	Sorghum	plastid	82.91	77.54
Os03t0684400-01	Rice	plastid	83.37	76.16
GSMUA_Achr7P01670_001	Banana	cytosol	24.02	69.8
Zm00001d033527_P001	Maize	plastid	81.52	69.76
VIT_06s0061g01060.t01	Wine grape	plastid	69.05	67.04
KRH22756	Soybean	mitochondrion, plastid	66.74	63.38
Solyc11g066660.1.1	Tomato	plastid	64.9	62.86
KRH26555	Soybean	plastid	66.28	62.8
CDY26960	Canola	plastid	66.28	62.66
AT5G22830.1	Thale cress	plastid	65.36	61.66
CDX92333	Canola	plastid	66.05	61.51
Bra002432.1-P	Field mustard	plastid	66.05	61.24
GSMUA_Achr8P03230_001	Banana	mitochondrion	68.82	60.2
PGSC0003DMT400001226	Potato	mitochondrion	51.96	57.4
GSMUA_Achr7P01660_001	Banana	plastid	36.49	52.67
HORVU2Hr1G086400.6	Barley	cytosol	15.01	21.52
HORVU5Hr1G094250.1	Barley	plastid	19.17	21.39
HORVU3Hr1G082880.2	Barley	cytosol, mitochondrion, peroxisome, vacuole	20.32	21.0
HORVU3Hr1G082870.5	Barley	mitochondrion	19.63	20.94
HORVU7Hr1G113400.9	Barley	plastid	20.55	20.18
HORVU3Hr1G092200.1	Barley	mitochondrion	19.4	18.75
HORVU1Hr1G052760.2	Barley	mitochondrion, plastid	18.01	16.28

Protein Annotations

Gene3D:1.20.58.340	Gene3D:2.40.128.330	MapMan:24.3.3.1	ncoils:Coil	GO:GO:0003674	GO:GO:0005215
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006810	GO:GO:0008150
GO:GO:0009507	GO:GO:0009536	GO:GO:0009628	GO:GO:0009941	GO:GO:0009987	GO:GO:0010027
GO:GO:0010117	GO:GO:0010960	GO:GO:0015095	GO:GO:0016020	GO:GO:0016021	GO:GO:0016043
GO:GO:0030001	GO:GO:0046873	GO:GO:0055085	GO:GO:1903830	EnsemblPlantsGene:HORVU4Hr1G004120	EnsemblPlants:HORVU4Hr1G004120.2
UniProt:M0XC62	InterPro:MgTranspt_CorA/ZnTranspt_ZntB	PFAM:PF01544	PANTHER:PTHR13890	PANTHER:PTHR13890:SF25	SUPFAM:SSF144083
TMHMM:TMhelix	UniParc:UPI000295AA3C	SEG:seg	:	:	:

Description

No Description!

Coordinates

chrchr4H:-:9468261..9474511

Molecular Weight (calculated)

48020.5 Da

IEP (calculated)

6.863

GRAVY (calculated)

-0.112

Length

433 amino acids

Sequence
(BLAST)

001: MASVSCSPCS TQAARHLLPL PLQLQLVRRL RRLPLPQLGL SSPARRGVPL PRAAEGAHGR AAAKEEDEVE EDDGARGTEG AGAARGSGRF AADYISLGIR
101: EPVYEVVEVK ANGSVSTEKI SRRQLLKSSG LRLRDTRSVD PSLWLMNSMP SLLVREQAIL LNLGSLRAIA MHERVLIFNY NSPGGKAFLE LLRPRLNPRN
201: INGGPAMPFQ LEVVEAALLS RIQRLEQRLM HVEPRVAALL EVLPNRLTGD VLEQLRLSKQ SLVELGSRAG DLKQMLIDLL EDPHEIRRIC IMGRNCTLDK
301: VSDDMECSVP LEKHIAEEEE EEIEMLLENY LQRCESCHGQ AERLLDSARE MEDSIAVNLS SRRLEVSRVE LLLQVGTFCV AVGALIAGIF GMNLKSYLEN
401: NTWAFWATTG GIAVGAVAGF FIMYKYLKDR KIL

Best Arabidopsis Sequence Match ( AT5G22830.2 )
(BLAST)

001: MALTPIPSTF TSLFNFSDHS PYPSPSLHYL LPGSSPSFSL QLSALSRTPI YFEALKVLSR SKCFAKSPTT AEDFVGDYES LNVSDDDDGS DSNSSDGDNG
101: GGRDDSKKID SSSSSSSSDS TSLGIREPVY EVVEVKATGA ISTRKINRRQ LLKSSGLRPR DIRSVDPSLF MTNSVPSLLV REHAILLNLG SLRAIAMRDR
201: VLIFDYNRRG GRAFVDTLMP RLNPRSMNGG PSMPFELEAV ESALISRIQR LEQRLMDIEP RVQALLEVLP NRLTADILEE LRISKQRLVE LGSRAGALRQ
301: MLLDLLEDPH EIRRICIMGR NCTLRRGDDD LECTLPSDKL IAEEEEEEIE MLLENYLQRC ESCHGQAERL LDSAKEMEDS IAVNLSSRRL EVSRFELLLQ
401: VGTFCVAVGA LIAGIFGMNL RSYLEEQASA FWLTTGGIII GAAVAFFLMY SYLSRRKIF

Arabidopsis Description

MRS2-11MRS2-11 [Source:UniProtKB/TrEMBL;Acc:A0A178ULQ2]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.