Factsheet for GSMUA_Achr8P03230_001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 1
mitochondrion 5
nucleus 1
plasma membrane 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr7P01680_001	Banana	endoplasmic reticulum, vacuole	7.07	83.33
GSMUA_Achr7P01670_001	Banana	cytosol	22.83	75.84
VIT_06s0061g01060.t01	Wine grape	plastid	62.42	69.28
HORVU4Hr1G004120.2	Barley	plastid	60.2	68.82
KRH26555	Soybean	plastid	62.02	67.18
KRH22756	Soybean	mitochondrion, plastid	61.62	66.89
TraesCS4B01G027800.1	Wheat	plastid	60.0	66.29
TraesCS4A01G286400.1	Wheat	plastid	60.0	66.29
TraesCS4D01G025300.1	Wheat	plastid	59.6	66.0
Os03t0684400-01	Rice	plastid	62.22	64.98
OQU91190	Sorghum	plastid	60.4	64.58
CDY26960	Canola	plastid	58.99	63.76
CDX92333	Canola	plastid	59.39	63.23
AT5G22830.1	Thale cress	plastid	58.59	63.18
Bra002432.1-P	Field mustard	plastid	59.6	63.17
Solyc11g066660.1.1	Tomato	plastid	56.57	62.64
GSMUA_Achr7P01660_001	Banana	plastid	35.76	59.0
Zm00001d033527_P001	Maize	plastid	59.6	58.3
PGSC0003DMT400001226	Potato	mitochondrion	45.66	57.65
GSMUA_Achr9P19390_001	Banana	plasma membrane	16.57	20.55
GSMUA_Achr10P...	Banana	mitochondrion	16.97	19.67
GSMUA_Achr11P...	Banana	cytosol, peroxisome, plasma membrane	16.16	19.32
GSMUA_Achr9P13370_001	Banana	mitochondrion	16.57	19.2
GSMUA_Achr1P23260_001	Banana	cytosol	16.36	18.28
GSMUA_Achr5P26100_001	Banana	cytosol	16.16	18.22
GSMUA_Achr4P22510_001	Banana	cytosol, mitochondrion, peroxisome, plastid	15.35	18.05
GSMUA_Achr4P29320_001	Banana	cytosol, peroxisome, plasma membrane	13.54	17.68
GSMUA_Achr11P...	Banana	cytosol	15.76	17.57
GSMUA_Achr5P01890_001	Banana	nucleus	16.16	16.16

Protein Annotations

EnsemblPlants:GSMUA_Achr8P03230_001	EnsemblPlants:GSMUA_Achr8T03230_001	EnsemblPlantsGene:GSMUA_Achr8G03230_001	Gene3D:1.20.58.340	Gene3D:2.40.128.330	GO:GO:0005575
GO:GO:0016020	GO:GO:0016021	ncoils:Coil	PANTHER:PTHR13890	PANTHER:PTHR13890:SF25	SEG:seg
SignalP:SignalP-noTM	TMHMM:TMhelix	UniParc:UPI00029632ED	UniProt:M0TM75	MapMan:24.3.3.1	:

Description

Hypothetical protein [Source:GMGC_GENE;Acc:GSMUA_Achr8G03230_001]

Coordinates

chr8:+:2258592..2271181

Molecular Weight (calculated)

54631.0 Da

IEP (calculated)

9.158

GRAVY (calculated)

-0.000

Length

495 amino acids

Sequence
(BLAST)

001: MSQPFLVECG RRSTRRLLLS FSCVLLPSMA VAASSSSTSS SLIIVFLDLP RLLRQNHPSA SHSPLRCPPA KNPSRSARRT KLLVPAAAFN PLLPSLRRKL
101: IPPPSRSLAD DRSGDDGAAV VEYVADGVDN GSSRAVGIGA RPGSPRPQRS AGSADSISLG IKEPVYEVIE VKSDGTMYTK KINRRQLLKS SGLRPRDVRS
201: VDPSLWLMNS MPSLLVREQA ILLNLGTLRA IAMHECVLIF DYNRKGGKAF LKSLLPRLNP RNMNVGCAMP FALEVVEAAL LSRIQRLEQK LMEVEPRVAS
301: LLEVLPNRLT ADVLEQLRLS KQTLVELGSK AGALKQMLLD LLEDPHEIRR ICIMGRNCTV QRGTSYMECS VPLDKQIAEE EEEEIEMLLE NYLQRCESCH
401: GQAERLLDSA KEMEDSIAVN LSSRRLEVSR VELLLQVGAF CVSVGALVAG IFGMNLKSYL EEKVCAFWLT TAGIIIGAVA AFFVVYSYLK SRRIF

Best Arabidopsis Sequence Match ( AT5G22830.2 )
(BLAST)

001: MALTPIPSTF TSLFNFSDHS PYPSPSLHYL LPGSSPSFSL QLSALSRTPI YFEALKVLSR SKCFAKSPTT AEDFVGDYES LNVSDDDDGS DSNSSDGDNG
101: GGRDDSKKID SSSSSSSSDS TSLGIREPVY EVVEVKATGA ISTRKINRRQ LLKSSGLRPR DIRSVDPSLF MTNSVPSLLV REHAILLNLG SLRAIAMRDR
201: VLIFDYNRRG GRAFVDTLMP RLNPRSMNGG PSMPFELEAV ESALISRIQR LEQRLMDIEP RVQALLEVLP NRLTADILEE LRISKQRLVE LGSRAGALRQ
301: MLLDLLEDPH EIRRICIMGR NCTLRRGDDD LECTLPSDKL IAEEEEEEIE MLLENYLQRC ESCHGQAERL LDSAKEMEDS IAVNLSSRRL EVSRFELLLQ
401: VGTFCVAVGA LIAGIFGMNL RSYLEEQASA FWLTTGGIII GAAVAFFLMY SYLSRRKIF

Arabidopsis Description

MRS2-11MRS2-11 [Source:UniProtKB/TrEMBL;Acc:A0A178ULQ2]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.