Factsheet for Os03t0684400-01

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 7
cytosol 1
nucleus 1

Predictors

GFP

MS/MS

Papers

plastid: 23926064

plasma membrane: 28056797

gfp PMID: 23926064 doi

T Saito, NI Kobayashi, K Tanoi, N Iwata, H Suzuki, R Iwata, TM Nakanishi

Graduate School of Agricultural and Life Sciences, The University of Tokyo, 1-1-1 Yayoi, Bunkyo-ku, Tokyo, 113-8657 Japan.

msms PMID: 28056797 doi

N Yang, T Wang

Key Laboratory of Plant Molecular Physiology, Institute of Botany, Chinese Academy of Sciences, and National Center for Plant Gene Research, 20 Nanxincun, Xiangshan, Haidianqu, Beijing, 100093, China., Key Laboratory of Plant Molecular Physiology, Institute of Botany, Chinese Academy of Sciences, and National Center for Plant Gene Research, 20 Nanxincun, Xiangshan, Haidianqu, Beijing, 100093, China. twang@ibcas.ac.cn.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
OQU91190	Sorghum	plastid	81.65	83.59
HORVU4Hr1G004120.2	Barley	plastid	76.16	83.37
TraesCS4A01G286400.1	Wheat	plastid	77.43	81.92
TraesCS4D01G025300.1	Wheat	plastid	77.0	81.66
TraesCS4B01G027800.1	Wheat	plastid	77.0	81.47
Zm00001d033527_P001	Maize	plastid	79.32	74.31
GSMUA_Achr7P01670_001	Banana	cytosol	21.73	69.13
VIT_06s0061g01060.t01	Wine grape	plastid	63.71	67.71
KRH22756	Soybean	mitochondrion, plastid	60.76	63.16
Solyc11g066660.1.1	Tomato	plastid	59.49	63.09
CDY26960	Canola	plastid	60.76	62.88
KRH26555	Soybean	plastid	60.55	62.8
GSMUA_Achr8P03230_001	Banana	mitochondrion	64.98	62.22
AT5G22830.1	Thale cress	plastid	60.13	62.09
CDX92333	Canola	plastid	60.76	61.94
Bra002432.1-P	Field mustard	plastid	60.76	61.67
PGSC0003DMT400001226	Potato	mitochondrion	48.1	58.16
GSMUA_Achr7P01660_001	Banana	plastid	35.44	56.0
Os04t0501100-00	Rice	cytosol, plasma membrane	10.97	23.11
Os03t0742400-01	Rice	plasma membrane	11.6	22.09
Os06t0650800-01	Rice	plasma membrane	19.2	20.87
Os01t0869200-01	Rice	mitochondrion, plastid	18.14	20.57
Os01t0908500-01	Rice	plasma membrane	17.93	19.14
Os04t0430900-00	Rice	cytosol, plastid	16.24	18.08
Os03t0137700-01	Rice	plastid	16.03	17.47

Protein Annotations

Gene3D:1.20.58.340	Gene3D:2.40.128.330	MapMan:24.3.3.1	EntrezGene:4333741	ProteinID:AAK14424.1	ProteinID:ABF98244.1
ProteinID:ABF98245.1	EMBL:AK100086	ProteinID:BAF12833.1	ProteinID:BAS85790.1	ncoils:Coil	ProteinID:EEE59710.1
GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0006810	GO:GO:0006811	GO:GO:0008150	GO:GO:0009507	GO:GO:0009536	GO:GO:0009628
GO:GO:0009941	GO:GO:0009987	GO:GO:0010027	GO:GO:0010117	GO:GO:0010960	GO:GO:0015095
GO:GO:0016020	GO:GO:0016021	GO:GO:0016043	GO:GO:0030001	GO:GO:0031969	GO:GO:0046873
GO:GO:0055085	GO:GO:1903830	InterPro:MgTranspt_CorA/ZnTranspt_ZntB	EnsemblPlantsGene:Os03g0684400	EnsemblPlants:Os03t0684400-01	PFAM:PF01544
PANTHER:PTHR13890	PANTHER:PTHR13890:SF25	UniProt:Q9AUK4	SUPFAM:SSF144083	TMHMM:TMhelix	UniParc:UPI00000A6946
RefSeq:XP_015633311.1	SEG:seg	:	:	:	:

Description

MRS2/MGT family member 6Mg2+ transporter protein, CorA-like domain containing protein. (Os03t0684400-01)

Coordinates

chr3:+:27287853..27294356

Molecular Weight (calculated)

51894.8 Da

IEP (calculated)

6.425

GRAVY (calculated)

-0.145

Length

474 amino acids

Sequence
(BLAST)

001: MASVSSSPSY SSQAAVLLLL HQPPHQHGHG GACLRYRGSQ SQGRGNAVAT SLGLSAAGRG GAGGLLLLPP LPALRAAEGK DGRAVTKDEE EEAAAAAVEE
101: EGEVEVRREE DKPGDDGSRE AAARGSGSGR FSADYISLGI REPVYEVIEV KSNGRMSTKK ISRRQLLKSS GLRLRDTRSV DPSLWLMNSM PSLLVREQAI
201: LVNLGSLRAI AMHERVLIFN YNSPGGKAFL DSLLPRLNPR NINGGPAMPF QLEVVEAALL SRIQRLERRL MRIEPRVGAL LEVLPNRLTA DVLEQLRLSK
301: QALVELGSRA GDLKQMLIDL LDDPHEIRRI CIMGRNCTLD KLSDNMECSV PLEKQIAEEE EEEIEMLLEN YLQRCESIHG QAERLLDSAR EMEDSIAVNL
401: SSRRLEVSRV ELLLQVGTFC VAIGALIAGI FGMNLKSYLE TNAWAFWATT GGIVVGAVAG FFIMYSYLKT RKIL

Best Arabidopsis Sequence Match ( AT5G22830.2 )
(BLAST)

001: MALTPIPSTF TSLFNFSDHS PYPSPSLHYL LPGSSPSFSL QLSALSRTPI YFEALKVLSR SKCFAKSPTT AEDFVGDYES LNVSDDDDGS DSNSSDGDNG
101: GGRDDSKKID SSSSSSSSDS TSLGIREPVY EVVEVKATGA ISTRKINRRQ LLKSSGLRPR DIRSVDPSLF MTNSVPSLLV REHAILLNLG SLRAIAMRDR
201: VLIFDYNRRG GRAFVDTLMP RLNPRSMNGG PSMPFELEAV ESALISRIQR LEQRLMDIEP RVQALLEVLP NRLTADILEE LRISKQRLVE LGSRAGALRQ
301: MLLDLLEDPH EIRRICIMGR NCTLRRGDDD LECTLPSDKL IAEEEEEEIE MLLENYLQRC ESCHGQAERL LDSAKEMEDS IAVNLSSRRL EVSRFELLLQ
401: VGTFCVAVGA LIAGIFGMNL RSYLEEQASA FWLTTGGIII GAAVAFFLMY SYLSRRKIF

Arabidopsis Description

MRS2-11MRS2-11 [Source:UniProtKB/TrEMBL;Acc:A0A178ULQ2]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.