CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 7
mitochondrion 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU4Hr1G004120.2	Barley	plastid	77.54	82.91
Os03t0684400-01	Rice	plastid	83.59	81.65
TraesCS4A01G286400.1	Wheat	plastid	77.75	80.36
Zm00001d033527_P001	Maize	plastid	87.47	80.04
TraesCS4B01G027800.1	Wheat	plastid	77.32	79.91
TraesCS4D01G025300.1	Wheat	plastid	76.89	79.64
GSMUA_Achr7P01670_001	Banana	cytosol	22.46	69.8
VIT_06s0061g01060.t01	Wine grape	plastid	64.36	66.82
KRH22756	Soybean	mitochondrion, plastid	61.77	62.72
KRH26555	Soybean	plastid	61.56	62.36
CDY26960	Canola	plastid	61.12	61.79
AT5G22830.1	Thale cress	plastid	60.69	61.22
CDX92333	Canola	plastid	61.34	61.08
Solyc11g066660.1.1	Tomato	plastid	58.96	61.07
Bra002432.1-P	Field mustard	plastid	61.34	60.81
GSMUA_Achr8P03230_001	Banana	mitochondrion	64.58	60.4
PGSC0003DMT400001226	Potato	mitochondrion	47.3	55.87
GSMUA_Achr7P01660_001	Banana	plastid	33.05	51.0
OQU76793	Sorghum	endoplasmic reticulum, peroxisome	18.57	24.71
OQU81611	Sorghum	peroxisome, plasma membrane, plastid	6.48	23.62
KXG25477	Sorghum	plastid	17.06	22.01
EES11075	Sorghum	cytosol, peroxisome, plasma membrane	20.3	21.32
EER90897	Sorghum	cytosol	17.49	20.93
EES01822	Sorghum	mitochondrion	18.14	20.29
KXG34188	Sorghum	plasma membrane	6.48	20.27
EES10822	Sorghum	mitochondrion	17.93	19.71
EES04071	Sorghum	mitochondrion	18.36	19.19
EER91996	Sorghum	mitochondrion	17.28	16.74
OQU93276	Sorghum	plastid	15.55	16.67

Protein Annotations

Gene3D:1.20.58.340	Gene3D:2.40.128.330	MapMan:24.3.3.1	EntrezGene:8067267	UniProt:A0A1Z5S5I5	ncoils:Coil
GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0006810	GO:GO:0008150	GO:GO:0009507	GO:GO:0009536	GO:GO:0009628	GO:GO:0009941
GO:GO:0009987	GO:GO:0010027	GO:GO:0010117	GO:GO:0010960	GO:GO:0015095	GO:GO:0016020
GO:GO:0016021	GO:GO:0016043	GO:GO:1903830	EnsemblPlants:OQU91190	ProteinID:OQU91190	ProteinID:OQU91190.1
PANTHER:PTHR13890	PANTHER:PTHR13890:SF25	EnsemblPlantsGene:SORBI_3001G135100	TMHMM:TMhelix	UniParc:UPI000B8BB18D	SEG:seg

Description

hypothetical protein

Coordinates

chr1:-:10653979..10659496

Molecular Weight (calculated)

51174.4 Da

IEP (calculated)

5.110

GRAVY (calculated)

-0.066

Length

463 amino acids

Sequence
(BLAST)

001: MASVALSSSS QAGLLVLPSP LLKPAVGACL RYRLPRLPPG LSSVRKGGIL PLPILVPPRA VEGNDGRAAV TKEEVEEEEE EEEVEVTKEG EEDTQERGGT
101: TGSTKEDAAR GSERFAADYI PLGIREPVYE AIEVRSNGRM STKKISRRQL LKSSGLRLRD TRSVDPSLWL MNSMPSLLVR EQAILLNLGS LRAIAMYERV
201: LIFNYNSPGG KAFLGLLLPR LNPRNINGGP AMPFQLEVVE AALISRIQRL EQRLMKIEPH VATLLEVLPN RLTADVLEQL RLSKQALVEL GSRAGDLKQM
301: LIDLLDDPHE IRRICIMGRN CTLDRLSDNM ECSVPLEKQI AEEEEEEIEM LLENYLQRCE SCHGQAERLL NSAREMEDSI AVNLSSRRLE VSRVELLLQV
401: GTFCVAIGAL IAGALIAGIF GMNLQSYLET NAWAFWATTG GIVVGAVAGF FLMYSYLKAR KIL

Best Arabidopsis Sequence Match ( AT5G22830.2 )
(BLAST)

001: MALTPIPSTF TSLFNFSDHS PYPSPSLHYL LPGSSPSFSL QLSALSRTPI YFEALKVLSR SKCFAKSPTT AEDFVGDYES LNVSDDDDGS DSNSSDGDNG
101: GGRDDSKKID SSSSSSSSDS TSLGIREPVY EVVEVKATGA ISTRKINRRQ LLKSSGLRPR DIRSVDPSLF MTNSVPSLLV REHAILLNLG SLRAIAMRDR
201: VLIFDYNRRG GRAFVDTLMP RLNPRSMNGG PSMPFELEAV ESALISRIQR LEQRLMDIEP RVQALLEVLP NRLTADILEE LRISKQRLVE LGSRAGALRQ
301: MLLDLLEDPH EIRRICIMGR NCTLRRGDDD LECTLPSDKL IAEEEEEEIE MLLENYLQRC ESCHGQAERL LDSAKEMEDS IAVNLSSRRL EVSRFELLLQ
401: VGTFCVAVGA LIAGIFGMNL RSYLEEQASA FWLTTGGIII GAAVAFFLMY SYLSRRKIF

Arabidopsis Description

MRS2-11MRS2-11 [Source:UniProtKB/TrEMBL;Acc:A0A178ULQ2]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.