CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, cytosol, plasma membrane

Predictor Summary:

nucleus 2
cytosol 1
mitochondrion 1
plasma membrane 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d003125_P001	Maize	cytosol, nucleus, plasma membrane, plastid	96.15	94.22
TraesCS2D01G354900.2	Wheat	cytosol, nucleus, plasma membrane	86.39	89.02
TraesCS2A01G354100.1	Wheat	cytosol, peroxisome, plasma membrane	86.17	88.78
TraesCS2B01G375200.1	Wheat	cytosol, peroxisome, plasma membrane	85.94	88.55
HORVU2Hr1G086400.6	Barley	cytosol	60.09	87.75
Os04t0501100-00	Rice	cytosol, plasma membrane	44.44	87.11
OQU76793	Sorghum	endoplasmic reticulum, peroxisome	57.6	72.99
Bra008431.1-P	Field mustard	plasma membrane	59.64	70.89
Bra035144.1-P	Field mustard	cytosol, peroxisome, plasma membrane	65.76	70.73
CDX87352	Canola	cytosol, peroxisome, plasma membrane	65.53	70.49
CDX88569	Canola	cytosol, peroxisome, plasma membrane	65.53	70.49
GSMUA_Achr9P13370_001	Banana	mitochondrion	65.99	68.15
CDY22292	Canola	plastid	61.9	67.41
CDY49735	Canola	mitochondrion, peroxisome, plasma membrane, plastid	61.9	67.24
CDY35061	Canola	plastid	63.95	67.14
PGSC0003DMT400073310	Potato	nucleus, peroxisome, plasma membrane, plastid	66.67	66.07
AT1G80900.1	Thale cress	cytosol, nucleus, peroxisome, plastid	66.21	65.91
GSMUA_Achr10P...	Banana	mitochondrion	63.72	65.81
KRH23679	Soybean	plastid	65.99	65.69
CDY33361	Canola	plastid	62.13	65.55
KRH09638	Soybean	plastid	65.76	65.46
AT1G16010.2	Thale cress	plastid	65.53	65.38
Bra026085.1-P	Field mustard	plastid	65.31	64.72
Solyc06g068490.2.1	Tomato	plastid	66.67	63.77
VIT_09s0018g00570.t01	Wine grape	nucleus	33.11	62.39
EER90897	Sorghum	cytosol	39.23	44.7
EES01822	Sorghum	mitochondrion	37.41	39.86
EES04071	Sorghum	mitochondrion	39.68	39.5
KXG25477	Sorghum	plastid	31.97	39.28
OQU81611	Sorghum	peroxisome, plasma membrane, plastid	11.11	38.58
EES10822	Sorghum	mitochondrion	36.28	38.0
KXG34188	Sorghum	plasma membrane	11.34	33.78
EER91996	Sorghum	mitochondrion	34.69	32.01
OQU93276	Sorghum	plastid	28.12	28.7
OQU91190	Sorghum	plastid	21.32	20.3

Protein Annotations

Gene3D:1.20.58.340	Gene3D:2.40.128.330	MapMan:24.3.3.1	EntrezGene:8075891	UniProt:C5YBJ2	ncoils:Coil
EnsemblPlants:EES11075	ProteinID:EES11075	ProteinID:EES11075.1	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575
GO:GO:0006810	GO:GO:0008150	GO:GO:0015095	GO:GO:0016020	GO:GO:0016021	GO:GO:1903830
PANTHER:PTHR13890	PANTHER:PTHR13890:SF10	EnsemblPlantsGene:SORBI_3006G137200	SUPFAM:SSF144083	TMHMM:TMhelix	UniParc:UPI0001A86D78
RefSeq:XP_002446747.1	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr6:+:49948483..49953310

Molecular Weight (calculated)

48912.6 Da

IEP (calculated)

5.070

GRAVY (calculated)

-0.094

Length

441 amino acids

Sequence
(BLAST)

001: MDHDHLKDRL LLPSSRAAAT NGPHHHRRAT PAPGSTGAGG PPCGGGGAGG VSIDVNGLKR RGGGRRSWVR VDAATGAAEA VEVAKPALMR RLDLPARDLR
101: LLDPLFVYPS AILGRERAVV CNLERLRCII TADEALVLRE PDAAGGAAAE EAVRRYVDEL QRRLVDRADD LPFEFIALEV ALEAACSFLD SQAIELEAEA
201: YPLLDELTAK ISTLNLERVR RLKSKLVALT RRVQKVRDEI EQLMDDDGDM AEMYLTEKKM RMEASMLDDE DLQGIDNSHN GLGSSLSAPV SPVSTPPATR
301: RLEKEFSFAR SRHSSFKSSD SSQYNIEELE MLLEAYFVVI DYTLSKLTSL KEYIDDTEDF INIQLDNVRN QLIQFELLLT TATFVVAIFG VVSGVFGMNF
401: EVPLFSVPHA FEWTLAITGV CAAVVFCCFL WYFKKRRFFP L

Best Arabidopsis Sequence Match ( AT1G16010.2 )
(BLAST)

001: MSELKERLLP PRPASAMNLR DASVTRPSAS GRPPLLGVDV LGLKKRGQGL RSWIRVDTSG NTQVMEVDKF TMMRRCDLPA RDLRLLDPLF VYPSTILGRE
101: KAIVVNLEQI RCIITADEVL LLNSLDNYVL RYVVELQQRL KTSSVGEMWQ QENSQLSRRR SRSFDNAFEN SSPDYLPFEF RALEIALEAA CTFLDSQASE
201: LEIEAYPLLD ELTSKISTLN LERVRRLKSR LVALTRRVQK VRDEIEQLMD DDGDMAEMYL TEKKRRMEGS MYGDQSLLGY RSNDGLSVSA PVSPVSSPPD
301: SRRLDKSLSI ARSRHDSARS SEGAENIEEL EMLLEAYFVV IDSTLNKLTS LKEYIDDTED FINIQLDNVR NQLIQFELLL TTATFVVAIF GVVAGIFGMN
401: FEIDFFNQPG AFRWVLIITG VCGFVIFSAF VWFFKYRRLM PL

Arabidopsis Description

MRS2-1Magnesium transporter MRS2-1 [Source:UniProtKB/Swiss-Prot;Acc:Q9S9N4]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.