CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

nucleus 2
mitochondrion 5
plastid 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d025416_P001	Maize	mitochondrion	78.86	83.42
KXG25477	Sorghum	plastid	56.29	66.02
Os04t0430900-00	Rice	cytosol, plastid	65.8	65.02
OQU81611	Sorghum	peroxisome, plasma membrane, plastid	18.29	60.63
KRH59642	Soybean	cytosol	22.09	56.71
KXG34188	Sorghum	plasma membrane	19.0	54.05
GSMUA_Achr5P26100_001	Banana	cytosol	54.63	52.39
EES04071	Sorghum	mitochondrion	54.16	51.47
GSMUA_Achr11P...	Banana	cytosol	52.97	50.23
EES01822	Sorghum	mitochondrion	46.56	47.34
KRH09687	Soybean	mitochondrion	33.97	46.28
KRH23620	Soybean	mitochondrion	45.61	46.27
VIT_07s0031g02820.t01	Wine grape	cytosol	48.46	46.05
Bra022441.1-P	Field mustard	cytosol	46.56	44.44
CDY66275	Canola	cytosol, peroxisome, plasma membrane	46.56	44.44
KRH40989	Soybean	mitochondrion	42.28	43.31
CDX95430	Canola	cytosol, golgi, peroxisome	44.89	41.54
OQU76793	Sorghum	endoplasmic reticulum, peroxisome	34.2	41.38
Bra038223.1-P	Field mustard	cytosol, golgi, peroxisome	45.13	41.3
CDY42196	Canola	cytosol	44.18	40.79
AT3G19640.1	Thale cress	cytosol, golgi, peroxisome, plastid	46.56	40.5
EER90897	Sorghum	cytosol	36.58	39.79
Solyc01g106900.2.1	Tomato	cytosol, peroxisome, plastid	46.79	39.56
PGSC0003DMT400066130	Potato	cytosol, peroxisome, plastid	46.56	39.36
EES11075	Sorghum	cytosol, peroxisome, plasma membrane	38.0	36.28
OQU93276	Sorghum	plastid	29.22	28.47
EER91996	Sorghum	mitochondrion	31.12	27.41
CDY58861	Canola	nucleus	47.03	27.12
OQU91190	Sorghum	plastid	19.71	17.93

Protein Annotations

Gene3D:2.40.128.330	MapMan:24.3.3.1	UniProt:C5Y8M7	EnsemblPlants:EES10822	ProteinID:EES10822	ProteinID:EES10822.1
GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0006810	GO:GO:0008150	GO:GO:0015095
GO:GO:0016020	GO:GO:0016021	GO:GO:0030001	GO:GO:0046873	GO:GO:0055085	GO:GO:1903830
InterPro:MgTranspt_CorA/ZnTranspt_ZntB	PFAM:PF01544	PANTHER:PTHR13890	PANTHER:PTHR13890:SF7	EnsemblPlantsGene:SORBI_3006G082200	TMHMM:TMhelix
UniParc:UPI0001A86FEF	RefSeq:XP_002446494.1	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr6:+:45079489..45081310

Molecular Weight (calculated)

45021.2 Da

IEP (calculated)

4.390

GRAVY (calculated)

-0.168

Length

421 amino acids

Sequence
(BLAST)

001: MAAAAAAFTR RRHGAAAPGA EWAAVSGAGA WRVEEVGKHQ LMRRTGLPAR DLRGLDPALS CPCSITGRDR AVVVNLERAR AVITATEVLV PAPRDPAVAP
101: LVGNLLARLA ASPTPPQASE EDEAAENGGG ALPPSSGGVG GGGGGGRDDG QPSARRDKAL PFEFRALEVC LEFSCKSLEQ ETCTLEKEAY PALDELSSNV
201: STLNLERARQ IKSRLLAISG RVQKVRDELE HLLDDDVDMA AMHLSDKLAY YQAAVDGRSA RFDTNNEPSE FDEERGREED EEGEGSFSEG GNGNGTSVVG
301: FTPKIDELEN LLEAYFVQVD GTLNKLSTLR EYVDDTEDYI NIMLDDKQNQ LLQMGILLST ATLVMSCAIA ITGVFGMNIT IPLYTASTEG VFWEVTGGIV
401: GATVAIYLVA LIFFKRSGIL Q

Best Arabidopsis Sequence Match ( AT3G19640.1 )
(BLAST)

001: MRGARPDEFN FSTNPSTPNT GQPTPTYPAG VGGGGGGRKK GVGVRTWLVL NSSGQSEPKE EGKHSIMRRT GLPARDLRIL DPLLSYPSTV LGRERAIVIN
101: LEHIKAIITA QEVLLLNSKD PSVSPFIDEL QRRILCHHHA TKPQEEQNSG GEPHTRVDPA QGEAGTEQSS GDQGSEAKKD AKQSLENQDG SKVLPFEFVA
201: LEACLEAASS SLEHEALRLE LEAHPALDKL TSKISTLNLE RVRQIKSRLV AITGRVQKVR DELEHLLDDD EDMAEMYLTE KLAQKLEDSS NSSMNESDTF
301: EVDLPQGDED DRLPPEFASE ANRDGRYLQA NDAHELLMST QSALSRNSRG THTSSTRSAM TNKLDVEELE MLLEAYFVQI DGILNKLSTL REYVDDTEDY
401: INIMLDDKQN HLLQMGVMLT TATLVMSAFI AVAGVFGMNI TIELFTDNKH GPSRFIWTVI GGSIGSICLY VGAIGWCKYK RLLE

Arabidopsis Description

MRS2-3MRS2-3 [Source:UniProtKB/TrEMBL;Acc:A0A178VLJ7]
SUBAcon: [peroxisome,golgi,plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.