CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

nucleus 2
cytosol 1
mitochondrion 3
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH09687	Soybean	mitochondrion	67.95	91.26
KRH59642	Soybean	cytosol	32.05	81.1
KRH40989	Soybean	mitochondrion	77.11	77.86
VIT_07s0031g02820.t01	Wine grape	cytosol	60.24	56.43
GSMUA_Achr5P26100_001	Banana	cytosol	54.22	51.25
GSMUA_Achr11P...	Banana	cytosol	54.46	50.9
KRH77919	Soybean	cytosol	48.19	50.89
EES04071	Sorghum	mitochondrion	53.73	50.34
Zm00001d042441_P001	Maize	mitochondrion	53.25	49.89
Os01t0908500-01	Rice	plasma membrane	53.25	49.77
KRH27585	Soybean	cytosol	47.71	49.62
HORVU3Hr1G092200.1	Barley	mitochondrion	53.49	49.55
Zm00001d012102_P001	Maize	mitochondrion	52.77	49.44
TraesCS3B01G448800.1	Wheat	mitochondrion	53.25	49.22
TraesCS3D01G408500.1	Wheat	mitochondrion	53.25	49.11
TraesCS3A01G414000.1	Wheat	mitochondrion	53.01	48.78
HORVU3Hr1G082870.5	Barley	mitochondrion	47.47	48.52
TraesCS3B01G413200.1	Wheat	mitochondrion	46.99	48.15
TraesCS3D01G373700.1	Wheat	mitochondrion	46.75	47.9
KXG25477	Sorghum	plastid	41.2	47.63
TraesCS3D01G373600.1	Wheat	mitochondrion	46.51	47.42
TraesCS3A01G380600.1	Wheat	mitochondrion	46.27	47.41
EES01822	Sorghum	mitochondrion	46.75	46.86
Os01t0869200-01	Rice	mitochondrion, plastid	46.99	46.65
Zm00001d003666_P001	Maize	mitochondrion	45.3	46.65
TraesCS3A01G380500.1	Wheat	mitochondrion	45.78	46.57
HORVU3Hr1G082880.2	Barley	cytosol, mitochondrion, peroxisome, vacuole	46.99	46.54
TraesCS3B01G413100.1	Wheat	cytosol, nucleus, plastid, vacuole	45.3	46.19
OQU81611	Sorghum	peroxisome, plasma membrane, plastid	13.98	45.67
EES10822	Sorghum	mitochondrion	46.27	45.61
Zm00001d025416_P001	Maize	mitochondrion	40.72	42.46
Os04t0430900-00	Rice	cytosol, plastid	42.65	41.55
KXG34188	Sorghum	plasma membrane	14.22	39.86
KRH34378	Soybean	cytosol, peroxisome, plastid	36.39	38.72
KRG92427	Soybean	cytosol, peroxisome, plasma membrane	36.39	38.23
KRH67301	Soybean	cytosol	34.94	37.37
KRG95626	Soybean	cytosol	34.7	37.11
KRH23679	Soybean	plastid	39.28	36.79
KRH09638	Soybean	plastid	39.28	36.79
KRH70907	Soybean	cytosol, nucleus, plasma membrane	34.46	34.54
KRH43038	Soybean	plastid	35.18	32.44
KRH59146	Soybean	plastid	34.46	31.71
KRH33492	Soybean	cytosol	17.11	31.0
KRH22756	Soybean	mitochondrion, plastid	20.24	18.42
KRH26555	Soybean	plastid	20.24	18.38

Protein Annotations

EntrezGene:100808805	Gene3D:2.40.128.330	MapMan:24.3.3.1	EMBL:ACUP02008480	EnsemblPlantsGene:GLYMA_13G368400	GO:GO:0003674
GO:GO:0005215	GO:GO:0005575	GO:GO:0006810	GO:GO:0008150	GO:GO:0015095	GO:GO:0016020
GO:GO:0016021	GO:GO:0030001	GO:GO:0046873	GO:GO:0055085	GO:GO:1903830	UniProt:I1M5X5
EnsemblPlants:KRH23620	ProteinID:KRH23620	ProteinID:KRH23620.1	InterPro:MgTranspt_CorA/ZnTranspt_ZntB	PFAM:PF01544	TMHMM:TMhelix
UniParc:UPI00029487D8	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr13:-:45393906..45398210

Molecular Weight (calculated)

46444.2 Da

IEP (calculated)

4.396

GRAVY (calculated)

-0.246

Length

415 amino acids

Sequence
(BLAST)

001: MRRKGVGTTG VKSWMVVSET GHARLEDVGK HSIMRRTGLP ARDLRVLDPV LSYPSSILGR ERAIVVNLEH VKAIITASEV LLINSSNPFF LSFLQDLHIR
101: LSNLNPSSMS NDMDGGYEEK PLANDSRNGS PVRIPEDSDA DFLVRADSLK SSAETGTGTG TGTPAPKPLP FEFKVLEACI ESACRCLESE TSTLEVEAYP
201: ALDELTSQLS TLNLERVRQI KSRLVALSGR VQKVADELEH LLDDDNDMAE MYLTDKLNAR LCDQTSLKEG YNSEFEDNDQ SDESNSEKYD RFLCPKLDVE
301: ELEMLLEAYF EQTNGILQRL TSLSEYVDDT EDYINIMLDD KQNELLQAAI IFDTINMILN AGIVVVGLFG MNIQIDLFNG QPRQFWATTG GTFGGCLLLF
401: LVCLWWGKKR YFLSH

Best Arabidopsis Sequence Match ( AT3G19640.1 )
(BLAST)

001: MRGARPDEFN FSTNPSTPNT GQPTPTYPAG VGGGGGGRKK GVGVRTWLVL NSSGQSEPKE EGKHSIMRRT GLPARDLRIL DPLLSYPSTV LGRERAIVIN
101: LEHIKAIITA QEVLLLNSKD PSVSPFIDEL QRRILCHHHA TKPQEEQNSG GEPHTRVDPA QGEAGTEQSS GDQGSEAKKD AKQSLENQDG SKVLPFEFVA
201: LEACLEAASS SLEHEALRLE LEAHPALDKL TSKISTLNLE RVRQIKSRLV AITGRVQKVR DELEHLLDDD EDMAEMYLTE KLAQKLEDSS NSSMNESDTF
301: EVDLPQGDED DRLPPEFASE ANRDGRYLQA NDAHELLMST QSALSRNSRG THTSSTRSAM TNKLDVEELE MLLEAYFVQI DGILNKLSTL REYVDDTEDY
401: INIMLDDKQN HLLQMGVMLT TATLVMSAFI AVAGVFGMNI TIELFTDNKH GPSRFIWTVI GGSIGSICLY VGAIGWCKYK RLLE

Arabidopsis Description

MRS2-3MRS2-3 [Source:UniProtKB/TrEMBL;Acc:A0A178VLJ7]
SUBAcon: [peroxisome,golgi,plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.