CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 5
mitochondrion 3
cytosol 1
nucleus 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH43038	Soybean	plastid	96.01	96.22
VIT_12s0034g02550.t01	Wine grape	plastid	74.72	74.39
GSMUA_Achr4P29320_001	Banana	cytosol, peroxisome, plasma membrane	60.31	71.77
PGSC0003DMT400064171	Potato	nucleus	68.51	71.53
Solyc01g103890.2.1	Tomato	nucleus	68.29	71.3
AT3G58970.1	Thale cress	mitochondrion, plastid	65.41	67.66
CDX92290	Canola	cytosol, mitochondrion, nucleus, plastid	62.53	67.14
Bra022373.1-P	Field mustard	cytosol, mitochondrion, nucleus, plastid	62.53	67.14
CDY65607	Canola	plastid	63.86	67.13
CDX99295	Canola	cytosol, mitochondrion, nucleus, plastid	62.31	67.06
Bra007423.1-P	Field mustard	plastid	63.41	66.67
CDY49260	Canola	plastid	63.19	66.43
TraesCS1B01G219000.1	Wheat	mitochondrion	63.86	61.54
TraesCS1D01G208700.1	Wheat	mitochondrion	63.41	61.51
TraesCS1A01G205400.1	Wheat	mitochondrion	62.75	60.99
HORVU1Hr1G052760.2	Barley	mitochondrion, plastid	63.64	59.92
EER91996	Sorghum	mitochondrion	62.75	59.2
Zm00001d029808_P001	Maize	mitochondrion, plastid	62.08	58.82
Zm00001d047388_P001	Maize	mitochondrion, plastid	61.64	58.4
CDY33715	Canola	cytosol	42.79	52.02
CDY39718	Canola	cytosol	43.02	51.32
AT4G28580.1	Thale cress	mitochondrion, plastid	45.68	50.49
KRH34378	Soybean	cytosol, peroxisome, plastid	41.69	48.21
Bra032683.1-P	Field mustard	plastid	36.59	48.1
Zm00001d027582_P001	Maize	plastid	46.12	47.49
Os03t0137700-01	Rice	plastid	45.68	47.36
KRG92427	Soybean	cytosol, peroxisome, plasma membrane	41.46	47.34
OQU93276	Sorghum	plastid	45.23	47.22
KRH67301	Soybean	cytosol	39.02	45.36
KRG95626	Soybean	cytosol	39.02	45.36
KRH59642	Soybean	cytosol	15.74	43.29
KRH77919	Soybean	cytosol	33.48	38.42
KRH23679	Soybean	plastid	37.25	37.92
KRH27585	Soybean	cytosol	33.48	37.84
KRH09638	Soybean	plastid	36.81	37.47
KRH70907	Soybean	cytosol, nucleus, plasma membrane	34.15	37.2
KRH33492	Soybean	cytosol	18.85	37.12
KRH09687	Soybean	mitochondrion	24.17	35.28
KRH23620	Soybean	mitochondrion	31.71	34.46
KRH40989	Soybean	mitochondrion	29.93	32.85
KRH22756	Soybean	mitochondrion, plastid	17.52	17.32
KRH26555	Soybean	plastid	17.52	17.29

Protein Annotations

Gene3D:1.20.58.340	EntrezGene:100812561	Gene3D:2.40.128.330	MapMan:24.3.3.1	EMBL:ACUP02003303	ncoils:Coil
EnsemblPlantsGene:GLYMA_05G168200	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0006810	GO:GO:0008150
GO:GO:0015095	GO:GO:0016020	GO:GO:0016021	GO:GO:0030001	GO:GO:0046873	GO:GO:0055085
GO:GO:1903830	UniProt:I1K496	EnsemblPlants:KRH59146	ProteinID:KRH59146	ProteinID:KRH59146.1	InterPro:MgTranspt_CorA/ZnTranspt_ZntB
PFAM:PF01544	PANTHER:PTHR13890	PANTHER:PTHR13890:SF2	SUPFAM:SSF144083	TMHMM:TMhelix	UniParc:UPI0002339B43
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr5:-:35871339..35874984

Molecular Weight (calculated)

50675.8 Da

IEP (calculated)

6.138

GRAVY (calculated)

-0.275

Length

451 amino acids

Sequence
(BLAST)

001: MGKGPFSFRR SASRRRPKKT AAPPPPPSPP QPPYAAGIAT SPDDNNNRLI AAGAGSSALT KAKKKTGGAR LWMRFDRSGR SELVELEKNA IIRHAAIPAR
101: DLRILGPVFS HSSNILAREK AMVVNLEFIK AIVTAEEVLL LDPLRQEVLP FVEQLRQQLP GKSQPKLLGG VEEQEGEMQV SNGRQWLPMP EAADGLQSEL
201: PFEFQVLEIA LEAVCTYLDS NVADLERGAY PVLDELARNV STKNLEHVRS LKSNLTRLLA RVQKVRDEIE HLLDDNEDMA QLYLTRKWLQ NQQFEEAHLG
301: ATTSNNFPNT SRSVRRLGSN RSESLVTCHY EDDNNVEDLE MLLDAYFMQL DGTRNKILSV REYIDDTEDY VNIQLDNHRN ELIQLQLTLT IASFAIAIET
401: MIAGAFGMNI PCNLYHIDGV FWPFVWITSA ACVLLFLLIL AYARWKKLLG S

Best Arabidopsis Sequence Match ( AT3G58970.1 )
(BLAST)

001: MGKGPLSFRR LSSIRHRKKG SAVKDDSAQT STPSSPPPPL PIHAGGSAVG ATGKAKKKTG GARLWMRFDR TGAMEVVECD KSTIIKRASV PARDLRILGP
101: VFSHSSNILA REKAIVVNLE VIKAIVTAEE VLLLDPLRPE VLPFVERLKQ QFPQRNGNEN ALQASANVQS PLDPEAAEGL QSELPFEFQV LEIALEVVCS
201: FVDKSVAALE TEAWPVLDEL TKNVSTENLE YVRSLKSNLT RLLARVQKVR DELEHLLDDN EDMADLYLTR KWIQNQQTEA ILAGTASNSI ALPAHNTSNL
301: HRLTSNRSAS MVTSNTEEDD VEDLEMLLEA YFMQLDGMRN KILTVREYID DTEDYVNIQL DNQRNELIQL QLTLTIASFA IAAETLLASL FGMNIPCPLY
401: SIHGVFGYFV WSVTALCIVL FMVTLGYARW KKLLGS

Arabidopsis Description

MRS2-4MRS2-4 [Source:UniProtKB/TrEMBL;Acc:A0A178VB54]
SUBAcon: [mitochondrion,plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.