Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT3G19640.1 | KRH42545 | AT1G70780.1 | 21798944 |
| AT3G19640.1 | KRH58638 | AT1G70780.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH77919 | Soybean | cytosol | 90.23 | 91.6 |
| Bra022441.1-P | Field mustard | cytosol | 68.42 | 61.9 |
| CDY66275 | Canola | cytosol, peroxisome, plasma membrane | 68.42 | 61.9 |
| Solyc01g106900.2.1 | Tomato | cytosol, peroxisome, plastid | 74.69 | 59.84 |
| PGSC0003DMT400066130 | Potato | cytosol, peroxisome, plastid | 74.19 | 59.44 |
| VIT_03s0091g01190.t01 | Wine grape | cytosol | 74.19 | 59.08 |
| AT3G19640.1 | Thale cress | cytosol, golgi, peroxisome, plastid | 70.43 | 58.06 |
| KRH59642 | Soybean | cytosol | 23.81 | 57.93 |
| CDX95430 | Canola | cytosol, golgi, peroxisome | 65.41 | 57.36 |
| CDY42196 | Canola | cytosol | 65.41 | 57.24 |
| Bra038223.1-P | Field mustard | cytosol, golgi, peroxisome | 65.66 | 56.96 |
| GSMUA_Achr5P01890_001 | Banana | nucleus | 65.41 | 52.73 |
| KRH09687 | Soybean | mitochondrion | 37.84 | 48.87 |
| KRH23620 | Soybean | mitochondrion | 49.62 | 47.71 |
| KRH40989 | Soybean | mitochondrion | 47.12 | 45.74 |
| KRH34378 | Soybean | cytosol, peroxisome, plastid | 42.61 | 43.59 |
| KRH23679 | Soybean | plastid | 48.12 | 43.34 |
| KRH09638 | Soybean | plastid | 47.87 | 43.12 |
| KRG92427 | Soybean | cytosol, peroxisome, plasma membrane | 42.36 | 42.78 |
| KRH67301 | Soybean | cytosol | 41.6 | 42.78 |
| KRG95626 | Soybean | cytosol | 41.35 | 42.53 |
| KRH70907 | Soybean | cytosol, nucleus, plasma membrane | 41.1 | 39.61 |
| CDY58861 | Canola | nucleus | 68.17 | 37.26 |
| KRH43038 | Soybean | plastid | 37.84 | 33.56 |
| KRH59146 | Soybean | plastid | 37.84 | 33.48 |
| KRH33492 | Soybean | cytosol | 19.05 | 33.19 |
| KRH22756 | Soybean | mitochondrion, plastid | 20.05 | 17.54 |
| KRH26555 | Soybean | plastid | 20.05 | 17.51 |
Protein Annotations
| Gene3D:1.20.58.340 | EntrezGene:100788454 | Gene3D:2.40.128.330 | MapMan:24.3.3.1 | EMBL:ACUP02006727 | ncoils:Coil |
| EnsemblPlantsGene:GLYMA_11G002200 | GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005575 | GO:GO:0006810 | GO:GO:0008150 |
| GO:GO:0015095 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:1903830 | UniProt:I1LFQ3 | EnsemblPlants:KRH27585 |
| ProteinID:KRH27585 | ProteinID:KRH27585.1 | PANTHER:PTHR13890 | PANTHER:PTHR13890:SF4 | TMHMM:TMhelix | UniParc:UPI00023CD1B2 |
| SEG:seg | : | : | : | : | : |
Description
hypothetical protein
Coordinates
chr11:-:115811..118160
Molecular Weight (calculated)
44525.2 Da
IEP (calculated)
4.477
GRAVY (calculated)
-0.179
Length
399 amino acids
Sequence
(BLAST)
(BLAST)
001: MRGGEERSTT GIRKKGSGVR QWLVLDGKGE TEVVEAGKHA IMRRTGLPAR DLRILDPLLS YPSTLLGRER AIVINLEHIK AIITAQELLL LNSRDPSVTP
101: FLHELQARII RHHNQADADP NPNPNDAIKI LPFEFVSLEA CLEAACSVLE NEAKTLEQEA HPALDKLTSK ISTLNLERVR QIKSRLVAIT GRVQKVRDEL
201: EHLLDDDEDM AEMYLSEKLA EQQVLDGDVV VVDDDDDDDD TSSADNGDLL QPHRTAPELS FDNVLGRDSA SFSAVTKQLD VEELEMLLEA YFVQIDGTLN
301: KLSTLREYVD DTEDYINIML DDKQNHLLQM GVMLTTATLV VSAFVVVAGI FGMNIHIELF DDQKAGMTQF LWTVGGSTAG TIFLYVVAIA WCKHKRLLE
101: FLHELQARII RHHNQADADP NPNPNDAIKI LPFEFVSLEA CLEAACSVLE NEAKTLEQEA HPALDKLTSK ISTLNLERVR QIKSRLVAIT GRVQKVRDEL
201: EHLLDDDEDM AEMYLSEKLA EQQVLDGDVV VVDDDDDDDD TSSADNGDLL QPHRTAPELS FDNVLGRDSA SFSAVTKQLD VEELEMLLEA YFVQIDGTLN
301: KLSTLREYVD DTEDYINIML DDKQNHLLQM GVMLTTATLV VSAFVVVAGI FGMNIHIELF DDQKAGMTQF LWTVGGSTAG TIFLYVVAIA WCKHKRLLE
001: MRGARPDEFN FSTNPSTPNT GQPTPTYPAG VGGGGGGRKK GVGVRTWLVL NSSGQSEPKE EGKHSIMRRT GLPARDLRIL DPLLSYPSTV LGRERAIVIN
101: LEHIKAIITA QEVLLLNSKD PSVSPFIDEL QRRILCHHHA TKPQEEQNSG GEPHTRVDPA QGEAGTEQSS GDQGSEAKKD AKQSLENQDG SKVLPFEFVA
201: LEACLEAASS SLEHEALRLE LEAHPALDKL TSKISTLNLE RVRQIKSRLV AITGRVQKVR DELEHLLDDD EDMAEMYLTE KLAQKLEDSS NSSMNESDTF
301: EVDLPQGDED DRLPPEFASE ANRDGRYLQA NDAHELLMST QSALSRNSRG THTSSTRSAM TNKLDVEELE MLLEAYFVQI DGILNKLSTL REYVDDTEDY
401: INIMLDDKQN HLLQMGVMLT TATLVMSAFI AVAGVFGMNI TIELFTDNKH GPSRFIWTVI GGSIGSICLY VGAIGWCKYK RLLE
101: LEHIKAIITA QEVLLLNSKD PSVSPFIDEL QRRILCHHHA TKPQEEQNSG GEPHTRVDPA QGEAGTEQSS GDQGSEAKKD AKQSLENQDG SKVLPFEFVA
201: LEACLEAASS SLEHEALRLE LEAHPALDKL TSKISTLNLE RVRQIKSRLV AITGRVQKVR DELEHLLDDD EDMAEMYLTE KLAQKLEDSS NSSMNESDTF
301: EVDLPQGDED DRLPPEFASE ANRDGRYLQA NDAHELLMST QSALSRNSRG THTSSTRSAM TNKLDVEELE MLLEAYFVQI DGILNKLSTL REYVDDTEDY
401: INIMLDDKQN HLLQMGVMLT TATLVMSAFI AVAGVFGMNI TIELFTDNKH GPSRFIWTVI GGSIGSICLY VGAIGWCKYK RLLE
Arabidopsis Description
MRS2-3MRS2-3 [Source:UniProtKB/TrEMBL;Acc:A0A178VLJ7]
SUBAcon: [peroxisome,golgi,plastid,cytosol]
SUBAcon: [peroxisome,golgi,plastid,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.