CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, plastid, cytosol

Predictor Summary:

nucleus 2
mitochondrion 2
cytosol 2
plastid 2
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRG92427	Soybean	cytosol, peroxisome, plasma membrane	96.15	94.94
Os03t0742400-01	Rice	plasma membrane	54.87	85.94
VIT_05s0020g04720.t01	Wine grape	cytosol, peroxisome, plasma membrane	83.59	83.8
EER90897	Sorghum	cytosol	79.23	79.84
TraesCS5D01G391700.1	Wheat	plastid	79.23	79.64
HORVU5Hr1G094250.1	Barley	plastid	78.72	79.12
TraesCS5A01G382400.1	Wheat	plastid	78.72	78.32
AT5G64560.1	Thale cress	cytosol	78.97	78.17
CDX81228	Canola	cytosol, mitochondrion, plastid	74.1	78.11
CDY56489	Canola	cytosol, peroxisome, plastid	75.13	77.51
TraesCS5B01G386300.1	Wheat	plastid	76.92	77.32
CDY51292	Canola	cytosol, peroxisome, plastid	74.87	77.25
Solyc03g005390.2.1	Tomato	cytosol, peroxisome, vacuole	77.95	76.96
KRH33492	Soybean	cytosol	45.13	76.86
CDY18706	Canola	cytosol, mitochondrion, plastid	75.64	76.82
Bra037781.1-P	Field mustard	cytosol, mitochondrion, plastid	75.64	76.82
Bra024309.1-P	Field mustard	cytosol, peroxisome, plastid	76.41	76.02
Bra031913.1-P	Field mustard	cytosol	66.15	75.66
CDX85800	Canola	cytosol	74.87	75.06
Bra028621.1-P	Field mustard	cytosol	74.87	75.06
CDY64845	Canola	mitochondrion, peroxisome, plastid	69.23	73.77
CDY64844	Canola	cytosol	73.33	73.52
KRG95626	Soybean	cytosol	73.08	73.45
CDY46811	Canola	cytosol	70.51	73.33
CDY31314	Canola	cytosol	71.54	72.66
KRH67301	Soybean	cytosol	72.05	72.42
AT5G09690.2	Thale cress	cytosol	72.82	71.54
AT5G09720.2	Thale cress	cytosol	48.97	64.97
KRH59642	Soybean	cytosol	19.23	45.73
KRH77919	Soybean	cytosol	44.87	44.53
KRH27585	Soybean	cytosol	43.59	42.61
KRH23679	Soybean	plastid	47.95	42.21
KRH09638	Soybean	plastid	47.95	42.21
KRH43038	Soybean	plastid	48.21	41.78
KRH59146	Soybean	plastid	48.21	41.69
KRH70907	Soybean	cytosol, nucleus, plasma membrane	41.28	38.89
KRH09687	Soybean	mitochondrion	30.26	38.19
KRH23620	Soybean	mitochondrion	38.72	36.39
KRH40989	Soybean	mitochondrion	36.67	34.79
KRH26555	Soybean	plastid	22.31	19.04
KRH22756	Soybean	mitochondrion, plastid	22.05	18.86

Protein Annotations

EntrezGene:100786817	Gene3D:2.40.128.330	MapMan:24.3.3.1	EMBL:ACUP02006594	EMBL:BT097163	UniProt:C6THN7
ncoils:Coil	EnsemblPlantsGene:GLYMA_10G180200	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0006810
GO:GO:0008150	GO:GO:0015095	GO:GO:0016020	GO:GO:0016021	GO:GO:0030001	GO:GO:0046873
GO:GO:0055085	GO:GO:1903830	EnsemblPlants:KRH34378	ProteinID:KRH34378	ProteinID:KRH34378.1	InterPro:MgTranspt_CorA/ZnTranspt_ZntB
PFAM:PF01544	PANTHER:PTHR13890	PANTHER:PTHR13890:SF8	SUPFAM:SSF144083	TMHMM:TMhelix	UniParc:UPI0001B16713
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr10:+:41387259..41392378

Molecular Weight (calculated)

43457.0 Da

IEP (calculated)

4.691

GRAVY (calculated)

-0.114

Length

390 amino acids

Sequence
(BLAST)

001: MARDGSVVPA DPQAMAVVKK KTQSSRSWIL FDATGQGTLL DMDKYAIMHR VQIHARDLRI LDPLLSYPST ILGREKAIVL NLEHIKAIIT AEEVLLRDPT
101: DENVIPVVAE LQRRLPRLGA GLKQEGDGKE YLGGQNDAEA AEEDESPFEF RALEVALEAI CSFLAARTSE LEMAAYPALD ELTSKISSRN LDRVRKLKSA
201: MTRLTARVQK VRDELEQLLD DDDDMADLYL SRKAGSASPV SGSGAANWFA ASPTIGSKIS RASLATVRLE ENDVEELEML LEAYFSEIDH TLNKLTTLRE
301: YIDDTEDYIN IQLDNHRNQL IQLELFLSSG TVCLSFYSLV AAIFGMNIPY TWNDNHGYMF KWVVIVSGVF SAVMFLIITA YARKKGLIGS

Best Arabidopsis Sequence Match ( AT5G64560.1 )
(BLAST)

001: MAQNGYLVPA DPSAVVTVKK KTPQASWALI DATGQSEPLD VDKYEIMHRV QIHARDLRIL DPNLSYPSTI LGRERAIVLN LEHIKAIITS EEVLLRDPSD
101: ENVIPVVEEL RRRLPVGNAS HNGGQGDGKE IAGAQNDGDT GDEDESPFEF RALEVALEAI CSFLAARTAE LETAAYPALD ELTSKISSRN LDRVRKLKSA
201: MTRLTARVQK VRDELEQLLD DDDDMADLYL SRKLSSASSP ISSIGEPNWY TTSPTIGSKI SRASRASLAT VHGDENDVEE LEMLLEAYFM QIDSTLNRLT
301: TLREYIDDTE DYINIQLDNH RNQLIQLELV LSSGTVCLSM YSLVAGIFGM NIPYTWNDGH GYMFKYVVGL TGTLCVVVFV IIMSYARYKG LVGS

Arabidopsis Description

MRS2-2Magnesium transporter MRS2-2 [Source:UniProtKB/Swiss-Prot;Acc:Q9FLG2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.