Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- mitochondrion 2
- cytosol 2
- peroxisome 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY31314 | Canola | cytosol | 97.87 | 95.57 |
| CDX81228 | Canola | cytosol, mitochondrion, plastid | 80.8 | 81.89 |
| CDY56489 | Canola | cytosol, peroxisome, plastid | 81.87 | 81.22 |
| CDY51292 | Canola | cytosol, peroxisome, plastid | 81.33 | 80.69 |
| CDY18706 | Canola | cytosol, mitochondrion, plastid | 82.4 | 80.47 |
| Os03t0742400-01 | Rice | plasma membrane | 50.13 | 75.5 |
| AT5G64560.1 | Thale cress | cytosol | 79.2 | 75.38 |
| VIT_05s0020g04720.t01 | Wine grape | cytosol, peroxisome, plasma membrane | 76.53 | 73.78 |
| EER90897 | Sorghum | cytosol | 72.8 | 70.54 |
| KRH34378 | Soybean | cytosol, peroxisome, plastid | 73.33 | 70.51 |
| TraesCS5D01G391700.1 | Wheat | plastid | 72.27 | 69.85 |
| KRG92427 | Soybean | cytosol, peroxisome, plasma membrane | 73.33 | 69.62 |
| CDY64845 | Canola | mitochondrion, peroxisome, plastid | 67.73 | 69.4 |
| HORVU5Hr1G094250.1 | Barley | plastid | 71.73 | 69.33 |
| TraesCS5A01G382400.1 | Wheat | plastid | 72.0 | 68.88 |
| CDX85800 | Canola | cytosol | 71.2 | 68.64 |
| CDY64844 | Canola | cytosol | 70.67 | 68.12 |
| Solyc03g005390.2.1 | Tomato | cytosol, peroxisome, vacuole | 70.93 | 67.34 |
| TraesCS5B01G386300.1 | Wheat | plastid | 69.6 | 67.27 |
| CDX88569 | Canola | cytosol, peroxisome, plasma membrane | 45.33 | 41.46 |
| CDX87352 | Canola | cytosol, peroxisome, plasma membrane | 45.07 | 41.22 |
| CDY35061 | Canola | plastid | 43.73 | 39.05 |
| CDY22292 | Canola | plastid | 41.07 | 38.02 |
| CDY49735 | Canola | mitochondrion, peroxisome, plasma membrane, plastid | 41.07 | 37.93 |
| CDY49260 | Canola | plastid | 43.2 | 37.76 |
| CDY65607 | Canola | plastid | 43.2 | 37.76 |
| CDY33361 | Canola | plastid | 41.6 | 37.32 |
| CDX99295 | Canola | cytosol, mitochondrion, nucleus, plastid | 41.6 | 37.23 |
| CDY66275 | Canola | cytosol, peroxisome, plasma membrane | 43.73 | 37.19 |
| CDX92290 | Canola | cytosol, mitochondrion, nucleus, plastid | 41.6 | 37.14 |
| CDY33715 | Canola | cytosol | 36.53 | 36.93 |
| CDY39718 | Canola | cytosol | 36.53 | 36.24 |
| CDY02984 | Canola | cytosol, peroxisome, plasma membrane | 40.27 | 35.87 |
| CDY36615 | Canola | cytosol, nucleus, peroxisome | 40.27 | 35.87 |
| CDY51207 | Canola | cytosol, nucleus, peroxisome | 40.0 | 35.63 |
| CDX95430 | Canola | cytosol, golgi, peroxisome | 40.27 | 33.19 |
| CDY42196 | Canola | cytosol | 39.47 | 32.46 |
| CDY58861 | Canola | nucleus | 43.73 | 22.47 |
| CDY26960 | Canola | plastid | 24.0 | 19.65 |
| CDX92333 | Canola | plastid | 24.0 | 19.35 |
Protein Annotations
| Gene3D:2.40.128.330 | MapMan:24.3.3.1 | GO:A0A078IAA7 | UniProt:A0A078IAA7 | EnsemblPlants:CDY46811 | ProteinID:CDY46811 |
| ProteinID:CDY46811.1 | ncoils:Coil | GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005575 | GO:GO:0006810 |
| GO:GO:0008150 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0030001 | GO:GO:0046873 | GO:GO:0055085 |
| EnsemblPlantsGene:GSBRNA2T00086246001 | InterPro:MgTranspt_CorA/ZnTranspt_ZntB | PFAM:PF01544 | PANTHER:PTHR13890 | PANTHER:PTHR13890:SF8 | SUPFAM:SSF144083 |
| TMHMM:TMhelix | UniParc:UPI0004EDF873 | SEG:seg | : | : | : |
Description
BnaC02g43190DBnaC02g43190D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IAA7]
Coordinates
chrLK032686:-:73330..75695
Molecular Weight (calculated)
42109.3 Da
IEP (calculated)
5.053
GRAVY (calculated)
-0.113
Length
375 amino acids
Sequence
(BLAST)
(BLAST)
001: MAHINGYVVA AGEKKKASQP SWNWVLINAT GETKALDVDK YAVMHRVQIH ARDLRIIDPN LSYPSTILGR ERAIVLNLEH IKAIITSDEV LLRDPSHENV
101: IPIVKELERR LPVGNQAHHA AHNDADAGEE DESPFEFRAL EVFLEAICSF LAARTTELET TAYPALDELT SKISSGNLDR VRKLKSATTR LTARVQKVRD
201: ELVHLLDDDD DMADLYLSRK LSCACSMASS PNFYLTSPTI GSKISRASVA TVREDENDVE QLEMLLEAYF MQIDSTLNKL TTLREYVQDT DDYISIQMDN
301: RRNELIQLEV VLGSGTVCSA FYSLVAGIFG MNIPYTWNDN HGYMFKWVCI VTGAICVFSL VFIMSYARFK GLMGS
101: IPIVKELERR LPVGNQAHHA AHNDADAGEE DESPFEFRAL EVFLEAICSF LAARTTELET TAYPALDELT SKISSGNLDR VRKLKSATTR LTARVQKVRD
201: ELVHLLDDDD DMADLYLSRK LSCACSMASS PNFYLTSPTI GSKISRASVA TVREDENDVE QLEMLLEAYF MQIDSTLNKL TTLREYVQDT DDYISIQMDN
301: RRNELIQLEV VLGSGTVCSA FYSLVAGIFG MNIPYTWNDN HGYMFKWVCI VTGAICVFSL VFIMSYARFK GLMGS
001: MSPDGELVPV DSSAVVTAKR KTSQLSRSWI SIDATGQKTV LDVDKHVIMH RVQIHARDLR ILDPNLFYPS AILGRERAIV LNLEHIKAII TAEEVLIRDS
101: SDENVIPVLE EFQRRLPVGN EAHGVHGDGD LGEEDESPFE FRALEVALEA ICSFLAARTT ELEKFAYPAL DELTLKISSR NLERVRKLKS AMTRLTARVQ
201: KVRDELEQLL DDDGDMADLY LTRKLVGASS SVSVSDEPIW YPTSPTIGSM ISRASRVSLV TVRGDDETDV EELEMLLEAY FMQIDSTLNK LTELREYIDD
301: TEDYINIQLD NHRNQLIQLE LMLSAGTVCV SVYSMIAGIF GMNIPNTWNH DHGYIFKWVV SLTGTFCIVL FVIILSYARF RGLIGS
101: SDENVIPVLE EFQRRLPVGN EAHGVHGDGD LGEEDESPFE FRALEVALEA ICSFLAARTT ELEKFAYPAL DELTLKISSR NLERVRKLKS AMTRLTARVQ
201: KVRDELEQLL DDDGDMADLY LTRKLVGASS SVSVSDEPIW YPTSPTIGSM ISRASRVSLV TVRGDDETDV EELEMLLEAY FMQIDSTLNK LTELREYIDD
301: TEDYINIQLD NHRNQLIQLE LMLSAGTVCV SVYSMIAGIF GMNIPNTWNH DHGYIFKWVV SLTGTFCIVL FVIILSYARF RGLIGS
Arabidopsis Description
ATMGT7magnesium transporter 7 [Source:TAIR;Acc:AT5G09690]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.