Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- nucleus 1
- plastid 2
- mitochondrion 1
- plasma membrane 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY49735 | Canola | mitochondrion, peroxisome, plasma membrane, plastid | 100.0 | 99.75 |
| Bra008431.1-P | Field mustard | plasma membrane | 82.47 | 90.03 |
| CDX88569 | Canola | cytosol, peroxisome, plasma membrane | 86.91 | 85.85 |
| CDX87352 | Canola | cytosol, peroxisome, plasma membrane | 86.17 | 85.12 |
| CDY35061 | Canola | plastid | 87.9 | 84.76 |
| CDY33361 | Canola | plastid | 87.41 | 84.69 |
| AT1G80900.1 | Thale cress | cytosol, nucleus, peroxisome, plastid | 92.1 | 84.2 |
| PGSC0003DMT400073310 | Potato | nucleus, peroxisome, plasma membrane, plastid | 84.69 | 77.08 |
| OQU76793 | Sorghum | endoplasmic reticulum, peroxisome | 65.43 | 76.15 |
| KRH23679 | Soybean | plastid | 83.21 | 76.07 |
| KRH09638 | Soybean | plastid | 82.96 | 75.85 |
| TraesCS7B01G414200.1 | Wheat | endoplasmic reticulum, plasma membrane | 64.94 | 75.57 |
| VIT_09s0018g00600.t01 | Wine grape | nucleus, peroxisome, plasma membrane | 82.22 | 75.0 |
| Solyc06g068490.2.1 | Tomato | plastid | 84.69 | 74.4 |
| GSMUA_Achr9P13370_001 | Banana | mitochondrion | 76.3 | 72.37 |
| GSMUA_Achr10P... | Banana | mitochondrion | 73.58 | 69.79 |
| Zm00001d000430_P001 | Maize | plastid | 72.1 | 68.22 |
| Zm00001d036714_P002 | Maize | plastid | 71.6 | 67.44 |
| HORVU2Hr1G086400.6 | Barley | cytosol | 50.12 | 67.22 |
| Os06t0650800-01 | Rice | plasma membrane | 72.1 | 66.97 |
| HORVU7Hr1G113400.9 | Barley | plastid | 71.85 | 65.99 |
| TraesCS7D01G494700.1 | Wheat | plastid | 72.1 | 65.62 |
| TraesCS7A01G506600.1 | Wheat | plastid | 71.6 | 65.46 |
| TraesCS2A01G354100.1 | Wheat | cytosol, peroxisome, plasma membrane | 68.4 | 64.72 |
| TraesCS2D01G354900.2 | Wheat | cytosol, nucleus, plasma membrane | 68.4 | 64.72 |
| TraesCS2B01G375200.1 | Wheat | cytosol, peroxisome, plasma membrane | 68.15 | 64.49 |
| EES11075 | Sorghum | cytosol, peroxisome, plasma membrane | 67.41 | 61.9 |
| Zm00001d003125_P001 | Maize | cytosol, nucleus, plasma membrane, plastid | 66.67 | 60.0 |
| Os04t0501100-00 | Rice | cytosol, plasma membrane | 30.86 | 55.56 |
| CDY51207 | Canola | cytosol, nucleus, peroxisome | 52.35 | 50.36 |
| CDY02984 | Canola | cytosol, peroxisome, plasma membrane | 52.1 | 50.12 |
| CDY36615 | Canola | cytosol, nucleus, peroxisome | 52.1 | 50.12 |
| CDY64845 | Canola | mitochondrion, peroxisome, plastid | 40.49 | 44.81 |
| CDY51292 | Canola | cytosol, peroxisome, plastid | 41.73 | 44.71 |
| CDY56489 | Canola | cytosol, peroxisome, plastid | 41.48 | 44.44 |
| CDX81228 | Canola | cytosol, mitochondrion, plastid | 40.0 | 43.78 |
| CDX85800 | Canola | cytosol | 41.48 | 43.19 |
| CDY64844 | Canola | cytosol | 41.48 | 43.19 |
| CDY18706 | Canola | cytosol, mitochondrion, plastid | 40.0 | 42.19 |
| CDY46811 | Canola | cytosol | 38.02 | 41.07 |
| CDY66275 | Canola | cytosol, peroxisome, plasma membrane | 44.69 | 41.04 |
| CDY31314 | Canola | cytosol | 37.78 | 39.84 |
| CDX95430 | Canola | cytosol, golgi, peroxisome | 43.95 | 39.12 |
| CDY42196 | Canola | cytosol | 43.21 | 38.38 |
| CDY33715 | Canola | cytosol | 31.11 | 33.96 |
| CDX92290 | Canola | cytosol, mitochondrion, nucleus, plastid | 34.81 | 33.57 |
| CDY65607 | Canola | plastid | 35.56 | 33.57 |
| CDX99295 | Canola | cytosol, mitochondrion, nucleus, plastid | 34.57 | 33.41 |
| CDY39718 | Canola | cytosol | 31.11 | 33.33 |
| CDY49260 | Canola | plastid | 35.06 | 33.1 |
| CDY58861 | Canola | nucleus | 44.44 | 24.66 |
| CDY26960 | Canola | plastid | 21.48 | 19.0 |
| CDX92333 | Canola | plastid | 21.73 | 18.92 |
Protein Annotations
| Gene3D:1.20.58.340 | Gene3D:2.40.128.330 | MapMan:24.3.3.1 | GO:A0A078GB34 | UniProt:A0A078GB34 | EnsemblPlants:CDY22292 |
| ProteinID:CDY22292 | ProteinID:CDY22292.1 | ncoils:Coil | GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005575 |
| GO:GO:0006810 | GO:GO:0008150 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0030001 | GO:GO:0046873 |
| GO:GO:0055085 | EnsemblPlantsGene:GSBRNA2T00018757001 | InterPro:MgTranspt_CorA/ZnTranspt_ZntB | PFAM:PF01544 | PANTHER:PTHR13890 | PANTHER:PTHR13890:SF10 |
| SUPFAM:SSF144083 | TMHMM:TMhelix | UniParc:UPI0004EE3AF9 | SEG:seg | : | : |
Description
BnaC02g25960DBnaC02g25960D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GB34]
Coordinates
chrLK032129:+:611064..613341
Molecular Weight (calculated)
45895.5 Da
IEP (calculated)
5.409
GRAVY (calculated)
-0.141
Length
405 amino acids
Sequence
(BLAST)
(BLAST)
001: MSDLKERLLP PRPASAINLR GEAASRPSAS GRQPLLGVDV SGLKKRGQGL KSWIRVDTFA NTQVIEVDKF SMMRRCDLPA RDLRLLDPLF VYPSTILGRE
101: RAIVVNLEQI RCIITADEVL LLNSLDNYVW NQDSNELIRR RNNIALEAAC TFLDAQASEL EIEAYPLLDE LTSKISTLNL ERVRRLKSRL VALTRRVQKV
201: RDEIEQLMDD DGDMAEMYLT EKKKRMEGSL NGGDHHSLLG YRSNDGLSLS APVSPVSSPP DSSRRLEKSL SIARSRHDSA RSSESATENI EELEMLLEAY
301: FVVIDSTLNK LTSLKEYIDD TEDFINIQLD NVRNQLIQFE LLLTTATFVV AIFGVVAGIF GMNFEIDFFE KPGAFKWVLT ITGVCGLLVF LAFLWFYKRR
401: RLMPL
101: RAIVVNLEQI RCIITADEVL LLNSLDNYVW NQDSNELIRR RNNIALEAAC TFLDAQASEL EIEAYPLLDE LTSKISTLNL ERVRRLKSRL VALTRRVQKV
201: RDEIEQLMDD DGDMAEMYLT EKKKRMEGSL NGGDHHSLLG YRSNDGLSLS APVSPVSSPP DSSRRLEKSL SIARSRHDSA RSSESATENI EELEMLLEAY
301: FVVIDSTLNK LTSLKEYIDD TEDFINIQLD NVRNQLIQFE LLLTTATFVV AIFGVVAGIF GMNFEIDFFE KPGAFKWVLT ITGVCGLLVF LAFLWFYKRR
401: RLMPL
001: MSELKERLLP PRPASAINLR GDAGSRPSPS GRQPLLGVDV LGLKKRGQGL KSWIRVDTSA NSQVIEVDKF TMMRRCDLPA RDLRLLDPLF VYPSTILGRE
101: KAIVVNLEQI RCIITADEVL LLNSLDNYVL RYVVELQQRL KASSVTEVWN QDSLELSRRR SRSLDNVLQN SSPDYLPFEF RALEVALEAA CTFLDSQASE
201: LEIEAYPLLD ELTSKISTLN LERARRLKSR LVALTRRVQK VRDEIEQLMD DDGDMAEMYL TEKKKRMEGS LYGDQSLPVY RTNDCFSLSA PVSPVSSPPE
301: SRRLEKSLSI VRSRHDSARS SEDATENIEE LEMLLEAYFV VIDSTLNKLT SLKEYIDDTE DFINIQLDNV RNQLIQFELL LTTATFVVAI FGVVAGIFGM
401: NFEIDFFEKP GAFKWVLAIT GVCGLVVFLA FLWYYKRRRL MPL
101: KAIVVNLEQI RCIITADEVL LLNSLDNYVL RYVVELQQRL KASSVTEVWN QDSLELSRRR SRSLDNVLQN SSPDYLPFEF RALEVALEAA CTFLDSQASE
201: LEIEAYPLLD ELTSKISTLN LERARRLKSR LVALTRRVQK VRDEIEQLMD DDGDMAEMYL TEKKKRMEGS LYGDQSLPVY RTNDCFSLSA PVSPVSSPPE
301: SRRLEKSLSI VRSRHDSARS SEDATENIEE LEMLLEAYFV VIDSTLNKLT SLKEYIDDTE DFINIQLDNV RNQLIQFELL LTTATFVVAI FGVVAGIFGM
401: NFEIDFFEKP GAFKWVLAIT GVCGLVVFLA FLWYYKRRRL MPL
Arabidopsis Description
MRS2-10Magnesium transporter MRS2-10 [Source:UniProtKB/Swiss-Prot;Acc:Q9SAH0]
SUBAcon: [peroxisome,plastid,nucleus,cytosol]
SUBAcon: [peroxisome,plastid,nucleus,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.