Factsheet for TraesCS7B01G414200.1

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, plasma membrane

Predictor Summary:

nucleus 1
peroxisome 1
mitochondrion 2
extracellular 1
endoplasmic reticulum 2
vacuole 1
plasma membrane 2
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, plasma membrane
Any Predictor:	mitochondrion, nucleus, peroxisome, secretory
BaCelLo:	nucleus
MultiLoc:	peroxisome
Predotar:	secretory
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	endoplasmic reticulum
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
OQU76793	Sorghum	endoplasmic reticulum, peroxisome	93.68	93.68
TraesCS7A01G506600.1	Wheat	plastid	99.14	77.88
HORVU7Hr1G113400.9	Barley	plastid	98.56	77.78
TraesCS7D01G494700.1	Wheat	plastid	99.14	77.53
Bra008431.1-P	Field mustard	plasma membrane	80.75	75.74
Zm00001d000430_P001	Maize	plastid	92.53	75.23
Zm00001d036714_P002	Maize	plastid	92.82	75.12
Os06t0650800-01	Rice	plasma membrane	91.67	73.17
Bra035144.1-P	Field mustard	cytosol, peroxisome, plasma membrane	81.03	68.78
CDX88569	Canola	cytosol, peroxisome, plasma membrane	80.46	68.29
CDX87352	Canola	cytosol, peroxisome, plasma membrane	80.46	68.29
GSMUA_Achr9P13370_001	Banana	mitochondrion	83.33	67.92
VIT_09s0018g00570.t01	Wine grape	nucleus	45.11	67.09
GSMUA_Achr10P...	Banana	mitochondrion	81.03	66.04
CDY35061	Canola	plastid	78.74	65.24
KRH23679	Soybean	plastid	82.76	65.01
CDY22292	Canola	plastid	75.57	64.94
KRH09638	Soybean	plastid	82.47	64.79
CDY49735	Canola	mitochondrion, peroxisome, plasma membrane, plastid	75.57	64.78
PGSC0003DMT400073310	Potato	nucleus, peroxisome, plasma membrane, plastid	82.76	64.72
AT1G16010.2	Thale cress	plastid	81.03	63.8
CDY33361	Canola	plastid	76.44	63.64
Bra026085.1-P	Field mustard	plastid	80.75	63.15
AT1G80900.1	Thale cress	cytosol, nucleus, peroxisome, plastid	80.17	62.98
Solyc06g068490.2.1	Tomato	plastid	83.05	62.69
TraesCS2B01G375200.1	Wheat	cytosol, peroxisome, plasma membrane	73.56	59.81
TraesCS5B01G386300.1	Wheat	plastid	46.26	41.49
TraesCS3B01G448800.1	Wheat	mitochondrion	47.7	36.97
TraesCS3B01G413200.1	Wheat	mitochondrion	42.24	36.3
TraesCS3B01G413100.1	Wheat	cytosol, nucleus, plastid, vacuole	40.23	34.4
TraesCS1B01G219000.1	Wheat	mitochondrion	40.52	30.13
TraesCS4B01G027800.1	Wheat	plastid	24.43	18.97

Protein Annotations

EnsemblPlants:TraesCS7B01G414200.1	EnsemblPlantsGene:TraesCS7B01G414200	Gene3D:1.20.58.340	Gene3D:2.40.128.330	ncoils:Coil	PANTHER:PTHR13890
PANTHER:PTHR13890:SF10	SEG:seg	SUPFAM:SSF144083	TIGR:cd12823	TMHMM:TMhelix	MapMan:24.3.3.1

Description

No Description!

Coordinates

chr7B:-:682237765..682241680

Molecular Weight (calculated)

39690.9 Da

IEP (calculated)

4.462

GRAVY (calculated)

0.082

Length

348 amino acids

Sequence
(BLAST)

001: MMRRCELPAR DLRLLDPLFV YPSTVLGRER AIVVNLEQIR CVITADEVLL LNSLDSYVFQ YAAELQRRLL QRAEGDELPF EFRALELALE AACSFLDAQA
101: AELEIEAYPL LDELTSKIST LNLERVRRLK SRLVALTRRV QKVRDEIEQL MDDDGDMAEM YLTEKKMRME SSSVFGDQSL ATFNAAAAGT SVSAPVSPVS
201: SPTESRKLEK TYSLCRSRHD SVKSSDNTVT EHIEELEMLL EAYFVVIDST LNKLTSLKEY IDDTEDFINI QLDNVRNQLI QFELLLTTAT FVVAIFGVVA
301: GVFGMNFETD VFNIQNAFQW VLIITGVVGA FVFCFFVWFF KYKRLMPL

Best Arabidopsis Sequence Match ( AT1G16010.2 )
(BLAST)

001: MSELKERLLP PRPASAMNLR DASVTRPSAS GRPPLLGVDV LGLKKRGQGL RSWIRVDTSG NTQVMEVDKF TMMRRCDLPA RDLRLLDPLF VYPSTILGRE
101: KAIVVNLEQI RCIITADEVL LLNSLDNYVL RYVVELQQRL KTSSVGEMWQ QENSQLSRRR SRSFDNAFEN SSPDYLPFEF RALEIALEAA CTFLDSQASE
201: LEIEAYPLLD ELTSKISTLN LERVRRLKSR LVALTRRVQK VRDEIEQLMD DDGDMAEMYL TEKKRRMEGS MYGDQSLLGY RSNDGLSVSA PVSPVSSPPD
301: SRRLDKSLSI ARSRHDSARS SEGAENIEEL EMLLEAYFVV IDSTLNKLTS LKEYIDDTED FINIQLDNVR NQLIQFELLL TTATFVVAIF GVVAGIFGMN
401: FEIDFFNQPG AFRWVLIITG VCGFVIFSAF VWFFKYRRLM PL

Arabidopsis Description

MRS2-1Magnesium transporter MRS2-1 [Source:UniProtKB/Swiss-Prot;Acc:Q9S9N4]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.