Factsheet for TraesCS7D01G494700.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 2
plastid 4
mitochondrion 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7B01G414200.1	Wheat	endoplasmic reticulum, plasma membrane	77.53	99.14
TraesCS7A01G506600.1	Wheat	plastid	98.2	98.65
HORVU7Hr1G113400.9	Barley	plastid	96.4	97.28
OQU76793	Sorghum	endoplasmic reticulum, peroxisome	73.26	93.68
Zm00001d000430_P001	Maize	plastid	87.42	90.89
Zm00001d036714_P002	Maize	plastid	86.29	89.3
Os06t0650800-01	Rice	plasma membrane	86.52	88.3
GSMUA_Achr9P13370_001	Banana	mitochondrion	72.58	75.64
Bra008431.1-P	Field mustard	plasma membrane	62.92	75.47
Bra035144.1-P	Field mustard	cytosol, peroxisome, plasma membrane	69.44	75.37
CDX88569	Canola	cytosol, peroxisome, plasma membrane	69.21	75.12
CDX87352	Canola	cytosol, peroxisome, plasma membrane	68.99	74.88
GSMUA_Achr10P...	Banana	mitochondrion	70.56	73.54
CDY35061	Canola	plastid	69.21	73.33
CDY22292	Canola	plastid	65.62	72.1
CDY49735	Canola	mitochondrion, peroxisome, plasma membrane, plastid	65.62	71.92
KRH23679	Soybean	plastid	71.46	71.78
CDY33361	Canola	plastid	67.19	71.53
KRH09638	Soybean	plastid	70.79	71.11
PGSC0003DMT400073310	Potato	nucleus, peroxisome, plasma membrane, plastid	71.01	71.01
Bra026085.1-P	Field mustard	plastid	70.79	70.79
AT1G16010.2	Thale cress	plastid	69.89	70.36
AT1G80900.1	Thale cress	cytosol, nucleus, peroxisome, plastid	68.99	69.3
Solyc06g068490.2.1	Tomato	plastid	71.24	68.76
VIT_09s0018g00570.t01	Wine grape	nucleus	35.96	68.38
TraesCS2D01G354900.2	Wheat	cytosol, nucleus, plasma membrane	65.39	67.99
TraesCS5D01G391700.1	Wheat	plastid	40.67	46.65
TraesCS3D01G408500.1	Wheat	mitochondrion	39.1	38.67
TraesCS3D01G373700.1	Wheat	mitochondrion	35.06	38.52
TraesCS3D01G373600.1	Wheat	mitochondrion	33.71	36.85
TraesCS1D01G208700.1	Wheat	mitochondrion	34.83	33.33
TraesCS4D01G025300.1	Wheat	plastid	20.22	20.13

Protein Annotations

EnsemblPlants:TraesCS7D01G494700.1	EnsemblPlantsGene:TraesCS7D01G494700	Gene3D:1.20.58.340	Gene3D:2.40.128.330	ncoils:Coil	PANTHER:PTHR13890
PANTHER:PTHR13890:SF10	SEG:seg	SUPFAM:SSF144083	TIGR:cd12823	TMHMM:TMhelix	MapMan:24.3.3.1

Description

No Description!

Coordinates

chr7D:-:602185746..602189884

Molecular Weight (calculated)

49447.3 Da

IEP (calculated)

4.944

GRAVY (calculated)

-0.002

Length

445 amino acids

Sequence
(BLAST)

001: MADAVKQPLL HHQQPYAYPS HAASASSPAL PSVPHSGTAT PTPGAGGAAS ASFAGGRRFP GGLDVPNLKK RGGGTRSWIR VEAATASVQT LEVDKATMMR
101: RCELPARDLR LLDPLFVYPS TVLGRERAIV VNLEQIRCVI TADEVLLLNS LDSYVFQYAA ELQRRLLQRA EGDELPFEFR ALELALEAAC SFLDAQAAEL
201: EIEAYPLLDE LTSKISTLNL ERVRRLKSRL VALTRRVQKV RDEIEQLMDD DGDMAEMYLT EKKMRMESSS VFGDQSLATF NAAAAGTSVS APVSPVSSPT
301: ESRKLEKTYS LCRSRHDSVK SSDNSVTEHI EELEMLLEAY FVVIDSTLNK LTSLKEYIDD TEDFINIQLD NVRNQLIQFE LLLTTATFVV AIFGVVAGVF
401: GMNFETDVFS IQNAFQWVLI ITGVVGAFIF CFFVWFFKYK RLMPL

Best Arabidopsis Sequence Match ( AT1G16010.2 )
(BLAST)

001: MSELKERLLP PRPASAMNLR DASVTRPSAS GRPPLLGVDV LGLKKRGQGL RSWIRVDTSG NTQVMEVDKF TMMRRCDLPA RDLRLLDPLF VYPSTILGRE
101: KAIVVNLEQI RCIITADEVL LLNSLDNYVL RYVVELQQRL KTSSVGEMWQ QENSQLSRRR SRSFDNAFEN SSPDYLPFEF RALEIALEAA CTFLDSQASE
201: LEIEAYPLLD ELTSKISTLN LERVRRLKSR LVALTRRVQK VRDEIEQLMD DDGDMAEMYL TEKKRRMEGS MYGDQSLLGY RSNDGLSVSA PVSPVSSPPD
301: SRRLDKSLSI ARSRHDSARS SEGAENIEEL EMLLEAYFVV IDSTLNKLTS LKEYIDDTED FINIQLDNVR NQLIQFELLL TTATFVVAIF GVVAGIFGMN
401: FEIDFFNQPG AFRWVLIITG VCGFVIFSAF VWFFKYRRLM PL

Arabidopsis Description

MRS2-1Magnesium transporter MRS2-1 [Source:UniProtKB/Swiss-Prot;Acc:Q9S9N4]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.