Factsheet for TraesCS3D01G373600.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion, plastid
iPSORT:	plastid
MultiLoc:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3A01G380500.1	Wheat	mitochondrion	98.28	98.04
TraesCS3B01G413100.1	Wheat	cytosol, nucleus, plastid, vacuole	95.33	95.33
HORVU3Hr1G082880.2	Barley	cytosol, mitochondrion, peroxisome, vacuole	90.17	87.59
TraesCS3D01G373700.1	Wheat	mitochondrion	83.78	84.2
EES01822	Sorghum	mitochondrion	69.04	67.87
Os01t0869200-01	Rice	mitochondrion, plastid	68.55	66.75
KRH59642	Soybean	cytosol	22.6	56.1
GSMUA_Achr5P26100_001	Banana	cytosol	55.04	51.03
TraesCS3D01G408500.1	Wheat	mitochondrion	55.53	50.22
GSMUA_Achr11P...	Banana	cytosol	54.3	49.77
KRH09687	Soybean	mitochondrion	35.63	46.93
KRH23620	Soybean	mitochondrion	47.42	46.51
VIT_07s0031g02820.t01	Wine grape	cytosol	48.4	44.47
CDY66275	Canola	cytosol, peroxisome, plasma membrane	47.17	43.54
Bra022441.1-P	Field mustard	cytosol	47.17	43.54
KRH40989	Soybean	mitochondrion	43.73	43.31
CDX95430	Canola	cytosol, golgi, peroxisome	47.42	42.42
Bra038223.1-P	Field mustard	cytosol, golgi, peroxisome	47.42	41.96
CDY42196	Canola	cytosol	46.68	41.67
TraesCS5D01G391700.1	Wheat	plastid	38.57	40.46
AT3G19640.1	Thale cress	cytosol, golgi, peroxisome, plastid	47.91	40.29
PGSC0003DMT400066130	Potato	cytosol, peroxisome, plastid	48.4	39.56
Solyc01g106900.2.1	Tomato	cytosol, peroxisome, plastid	48.4	39.56
TraesCS2D01G354900.2	Wheat	cytosol, nucleus, plasma membrane	37.1	35.28
TraesCS7D01G494700.1	Wheat	plastid	36.85	33.71
TraesCS1D01G208700.1	Wheat	mitochondrion	33.91	29.68
CDY58861	Canola	nucleus	47.91	26.71
TraesCS4D01G025300.1	Wheat	plastid	20.64	18.79

Protein Annotations

EnsemblPlants:TraesCS3D01G373600.1	EnsemblPlantsGene:TraesCS3D01G373600	Gene3D:1.20.58.340	Gene3D:2.40.128.330	ncoils:Coil	PANTHER:PTHR13890
PANTHER:PTHR13890:SF12	SEG:seg	TIGR:cd12823	TMHMM:TMhelix	MapMan:24.3.3.1	:

Description

No Description!

Coordinates

chr3D:+:487222723..487224822

Molecular Weight (calculated)

45410.3 Da

IEP (calculated)

5.118

GRAVY (calculated)

-0.316

Length

407 amino acids

Sequence
(BLAST)

001: MERRRPQIAP SPPVSRRKAA AAASQEWLVV PAAGEQRAGE FGRHRIMEMT GLPARDLRML DPLLSYPSTI LGRDRAIVVN LEHVRAIVTA AEVLVRDPSN
101: PRLRPFLQEL HARLALPDAV TTNPATDGGD DQGNVPISGS AKIPPFEFKV LEVCLEHTSK CMETETSVLE SEAYPALDEL TTKVSTSNLD DVRQIKNRLV
201: QLSGRVQKVR DDIEHLLDDD TDMCEMYLTR KLAFQGVNNE SSVNVDSNKH AFPDHDHDHE KEEEDRGGDT ASSHGSSACV KHVEELEMLL EAYFVEFDGT
301: LNKLCHLRDY VDNTENYINL MLDKKQNQLL QMGVMLTTAT VVVTAGIVVV SLFGMNIHIE LMADPETPEM ARIKNMKFWE TTWGTVAGCA AIYLLAIYAG
401: KKSKYLQ

Best Arabidopsis Sequence Match ( AT1G80900.1 )
(BLAST)

001: MSELKERLLP PRPASAINLR GDAGSRPSPS GRQPLLGVDV LGLKKRGQGL KSWIRVDTSA NSQVIEVDKF TMMRRCDLPA RDLRLLDPLF VYPSTILGRE
101: KAIVVNLEQI RCIITADEVL LLNSLDNYVL RYVVELQQRL KASSVTEVWN QDSLELSRRR SRSLDNVLQN SSPDYLPFEF RALEVALEAA CTFLDSQASE
201: LEIEAYPLLD ELTSKISTLN LERARRLKSR LVALTRRVQK VRDEIEQLMD DDGDMAEMYL TEKKKRMEGS LYGDQSLPVY RTNDCFSLSA PVSPVSSPPE
301: SRRLEKSLSI VRSRHDSARS SEDATENIEE LEMLLEAYFV VIDSTLNKLT SLKEYIDDTE DFINIQLDNV RNQLIQFELL LTTATFVVAI FGVVAGIFGM
401: NFEIDFFEKP GAFKWVLAIT GVCGLVVFLA FLWYYKRRRL MPL

Arabidopsis Description

MRS2-10Magnesium transporter MRS2-10 [Source:UniProtKB/Swiss-Prot;Acc:Q9SAH0]
SUBAcon: [peroxisome,plastid,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.