Factsheet for HORVU3Hr1G082880.2

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, peroxisome, vacuole, cytosol

Predictor Summary:

plastid 1
cytosol 1
mitochondrion 1
vacuole 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3D01G373600.1	Wheat	mitochondrion	87.59	90.17
TraesCS3A01G380500.1	Wheat	mitochondrion	86.63	88.97
TraesCS3B01G413100.1	Wheat	cytosol, nucleus, plastid, vacuole	85.2	87.72
HORVU3Hr1G082870.5	Barley	mitochondrion	82.58	85.22
EES01822	Sorghum	mitochondrion	67.06	67.87
Os01t0869200-01	Rice	mitochondrion, plastid	67.3	67.46
KRH59642	Soybean	cytosol	21.96	56.1
GSMUA_Achr5P26100_001	Banana	cytosol	53.46	51.03
GSMUA_Achr11P...	Banana	cytosol	52.98	50.0
HORVU3Hr1G092200.1	Barley	mitochondrion	53.22	49.78
KRH09687	Soybean	mitochondrion	35.08	47.57
KRH23620	Soybean	mitochondrion	46.54	46.99
VIT_07s0031g02820.t01	Wine grape	cytosol	47.73	45.15
KRH40989	Soybean	mitochondrion	42.72	43.55
Bra022441.1-P	Field mustard	cytosol	45.58	43.31
CDY66275	Canola	cytosol, peroxisome, plasma membrane	45.58	43.31
CDX95430	Canola	cytosol, golgi, peroxisome	45.35	41.76
Bra038223.1-P	Field mustard	cytosol, golgi, peroxisome	45.58	41.52
CDY42196	Canola	cytosol	44.87	41.23
HORVU5Hr1G094250.1	Barley	plastid	37.71	40.72
AT3G19640.1	Thale cress	cytosol, golgi, peroxisome, plastid	45.82	39.67
PGSC0003DMT400066130	Potato	cytosol, peroxisome, plastid	46.78	39.36
Solyc01g106900.2.1	Tomato	cytosol, peroxisome, plastid	46.78	39.36
HORVU2Hr1G086400.6	Barley	cytosol	26.49	36.76
HORVU7Hr1G113400.9	Barley	plastid	34.84	33.11
HORVU1Hr1G052760.2	Barley	mitochondrion, plastid	34.13	29.85
CDY58861	Canola	nucleus	46.3	26.58
HORVU4Hr1G004120.2	Barley	plastid	21.0	20.32

Protein Annotations

EnsemblPlants:HORVU3Hr1G082880.2	EnsemblPlantsGene:HORVU3Hr1G082880	Gene3D:1.20.58.340	Gene3D:2.40.128.330	GO:GO:0005575	GO:GO:0016020
GO:GO:0016021	ncoils:Coil	PANTHER:PTHR13890	PANTHER:PTHR13890:SF12	SEG:seg	TMHMM:TMhelix
UniParc:UPI000B47B882	UniProt:A0A287LZ59	MapMan:24.3.3.1	:	:	:

Description

No Description!

Coordinates

chrchr3H:-:600687320..600689235

Molecular Weight (calculated)

46710.1 Da

IEP (calculated)

5.230

GRAVY (calculated)

-0.295

Length

419 amino acids

Sequence
(BLAST)

001: MERRHPQIAP SPPVSRRKAA AAASQEWLVV PAAGEQRAGE FGRHRIMEMT GLPARDLRML DPLLSYPSTI LGRDRAIVVN LEHVKAIVTA AEVLVRDPSN
101: LRLRPFLQEL HARLALPVRP HPPPFRQSCM DPATDGGGDL ELGDDQGGVP IPGSAKIPPF EFKVLEVCLE HTCKCMETET SALDSVVYPA LDKLTTKVST
201: SNLETVRQIK SRLVELSGRV QKVRDDIEHL LDDDRDMCEL YLTRKLAFQG VNNESLANVD SNKHASPDHD HEKKEEDGDD TESSHESSAC AKPDVEELEM
301: LLEAYFVQVD GTLNKLCHLR DYVENTEDYI NFMLDKKQNQ LLQMGVMLTT ATVVVTAGIV VVSLFGMNIH IELMADPETP EMARIKNMKF WETTWGTVAG
401: CAAIYLLAIY AGKKSKYLQ

Best Arabidopsis Sequence Match ( AT3G19640.1 )
(BLAST)

001: MRGARPDEFN FSTNPSTPNT GQPTPTYPAG VGGGGGGRKK GVGVRTWLVL NSSGQSEPKE EGKHSIMRRT GLPARDLRIL DPLLSYPSTV LGRERAIVIN
101: LEHIKAIITA QEVLLLNSKD PSVSPFIDEL QRRILCHHHA TKPQEEQNSG GEPHTRVDPA QGEAGTEQSS GDQGSEAKKD AKQSLENQDG SKVLPFEFVA
201: LEACLEAASS SLEHEALRLE LEAHPALDKL TSKISTLNLE RVRQIKSRLV AITGRVQKVR DELEHLLDDD EDMAEMYLTE KLAQKLEDSS NSSMNESDTF
301: EVDLPQGDED DRLPPEFASE ANRDGRYLQA NDAHELLMST QSALSRNSRG THTSSTRSAM TNKLDVEELE MLLEAYFVQI DGILNKLSTL REYVDDTEDY
401: INIMLDDKQN HLLQMGVMLT TATLVMSAFI AVAGVFGMNI TIELFTDNKH GPSRFIWTVI GGSIGSICLY VGAIGWCKYK RLLE

Arabidopsis Description

MRS2-3MRS2-3 [Source:UniProtKB/TrEMBL;Acc:A0A178VLJ7]
SUBAcon: [peroxisome,golgi,plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.