Factsheet for HORVU3Hr1G082870.5

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 3
plasma membrane 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	cytosol, mitochondrion, plasma membrane
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3D01G373700.1	Wheat	mitochondrion	94.09	94.32
TraesCS3B01G413200.1	Wheat	mitochondrion	93.6	93.83
TraesCS3A01G380600.1	Wheat	mitochondrion	93.1	93.33
HORVU3Hr1G082880.2	Barley	cytosol, mitochondrion, peroxisome, vacuole	85.22	82.58
Os01t0869200-01	Rice	mitochondrion, plastid	71.18	69.14
EES01822	Sorghum	mitochondrion	70.44	69.08
KRH59642	Soybean	cytosol	24.14	59.76
GSMUA_Achr5P26100_001	Banana	cytosol	57.64	53.3
GSMUA_Achr11P...	Banana	cytosol	56.16	51.35
HORVU3Hr1G092200.1	Barley	mitochondrion	56.4	51.12
KRH09687	Soybean	mitochondrion	36.7	48.22
KRH23620	Soybean	mitochondrion	48.52	47.47
VIT_07s0031g02820.t01	Wine grape	cytosol	50.74	46.5
KRH40989	Soybean	mitochondrion	45.57	45.01
Bra022441.1-P	Field mustard	cytosol	48.77	44.9
CDY66275	Canola	cytosol, peroxisome, plasma membrane	48.77	44.9
CDX95430	Canola	cytosol, golgi, peroxisome	48.28	43.08
Bra038223.1-P	Field mustard	cytosol, golgi, peroxisome	48.52	42.83
CDY42196	Canola	cytosol	47.78	42.54
AT3G19640.1	Thale cress	cytosol, golgi, peroxisome, plastid	49.51	41.53
HORVU5Hr1G094250.1	Barley	plastid	39.16	40.98
Solyc01g106900.2.1	Tomato	cytosol, peroxisome, plastid	49.51	40.36
PGSC0003DMT400066130	Potato	cytosol, peroxisome, plastid	49.26	40.16
HORVU2Hr1G086400.6	Barley	cytosol	28.33	38.08
HORVU7Hr1G113400.9	Barley	plastid	37.93	34.92
HORVU1Hr1G052760.2	Barley	mitochondrion, plastid	35.71	30.27
CDY58861	Canola	nucleus	49.01	27.26
HORVU4Hr1G004120.2	Barley	plastid	20.94	19.63

Protein Annotations

EnsemblPlants:HORVU3Hr1G082870.5	EnsemblPlantsGene:HORVU3Hr1G082870	Gene3D:1.20.58.340	Gene3D:2.40.128.330	GO:GO:0005575	GO:GO:0016020
GO:GO:0016021	ncoils:Coil	PANTHER:PTHR13890	PANTHER:PTHR13890:SF12	SEG:seg	TMHMM:TMhelix
UniParc:UPI000B46EB9F	UniProt:A0A287LZ58	MapMan:24.3.3.1	:	:	:

Description

No Description!

Coordinates

chrchr3H:-:600671460..600676539

Molecular Weight (calculated)

45710.7 Da

IEP (calculated)

4.764

GRAVY (calculated)

-0.363

Length

406 amino acids

Sequence
(BLAST)

001: MEQRRQPQTA PAPRRKAAPV ASQEWLVVPA AGEQRRGEFG RHRIMEMTGL PARDLRVLDP LLSYPSTILG RDRAIVVNLE HVKAIVTAAE VLVRDPGNPR
101: LHPFLQELHA RLALPDACTT NPASDDMELG DGQGNVPMPG SAKIQPFEFK VLEVCLEHTC KCMESETLAL EKEAYPALDK LTSKVSTLNL EHVRQIKSRL
201: VELSGRVQKV RDDIEQLVDD DTDMYEMYLT RKLAFQGVNE SSVKVDSNKH ASPDHENEKE EEDSGDDIES SHESSTYVKP DVEELEMLLE AYFVQFDGTL
301: NKLCHLRDYV DDTEDYINMM LDEKQNQLLQ MGVMLTTATV VITAGIVVVS LFGMNIHIEL TLDPETPEMA RIKNRKFWET TWATVAGCAA IYILAIYAGK
401: KSKYLQ

Best Arabidopsis Sequence Match ( AT3G19640.1 )
(BLAST)

001: MRGARPDEFN FSTNPSTPNT GQPTPTYPAG VGGGGGGRKK GVGVRTWLVL NSSGQSEPKE EGKHSIMRRT GLPARDLRIL DPLLSYPSTV LGRERAIVIN
101: LEHIKAIITA QEVLLLNSKD PSVSPFIDEL QRRILCHHHA TKPQEEQNSG GEPHTRVDPA QGEAGTEQSS GDQGSEAKKD AKQSLENQDG SKVLPFEFVA
201: LEACLEAASS SLEHEALRLE LEAHPALDKL TSKISTLNLE RVRQIKSRLV AITGRVQKVR DELEHLLDDD EDMAEMYLTE KLAQKLEDSS NSSMNESDTF
301: EVDLPQGDED DRLPPEFASE ANRDGRYLQA NDAHELLMST QSALSRNSRG THTSSTRSAM TNKLDVEELE MLLEAYFVQI DGILNKLSTL REYVDDTEDY
401: INIMLDDKQN HLLQMGVMLT TATLVMSAFI AVAGVFGMNI TIELFTDNKH GPSRFIWTVI GGSIGSICLY VGAIGWCKYK RLLE

Arabidopsis Description

MRS2-3MRS2-3 [Source:UniProtKB/TrEMBL;Acc:A0A178VLJ7]
SUBAcon: [peroxisome,golgi,plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.