Factsheet for VIT_07s0031g02820.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
plastid 1
mitochondrion 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH59642	Soybean	cytosol	24.83	67.07
KRH23620	Soybean	mitochondrion	56.43	60.24
KRH09687	Soybean	mitochondrion	41.99	60.19
KRH40989	Soybean	mitochondrion	54.63	58.88
GSMUA_Achr5P26100_001	Banana	cytosol	57.56	58.09
GSMUA_Achr11P...	Banana	cytosol	55.98	55.86
TraesCS3B01G448800.1	Wheat	mitochondrion	55.98	55.23
TraesCS3D01G408500.1	Wheat	mitochondrion	55.98	55.11
Os01t0908500-01	Rice	plasma membrane	55.08	54.95
HORVU3Hr1G092200.1	Barley	mitochondrion	55.53	54.91
EES04071	Sorghum	mitochondrion	54.85	54.85
TraesCS3A01G414000.1	Wheat	mitochondrion	55.76	54.77
Zm00001d042441_P001	Maize	mitochondrion	54.63	54.63
Zm00001d012102_P001	Maize	mitochondrion	54.4	54.4
OQU81611	Sorghum	peroxisome, plasma membrane, plastid	14.67	51.18
HORVU3Hr1G082870.5	Barley	mitochondrion	46.5	50.74
TraesCS3B01G413200.1	Wheat	mitochondrion	46.28	50.62
TraesCS3A01G380600.1	Wheat	mitochondrion	46.28	50.62
TraesCS3D01G373700.1	Wheat	mitochondrion	46.05	50.37
EES01822	Sorghum	mitochondrion	46.73	50.0
Zm00001d003666_P001	Maize	mitochondrion	44.7	49.13
KXG25477	Sorghum	plastid	39.73	49.03
EES10822	Sorghum	mitochondrion	46.05	48.46
TraesCS3B01G413100.1	Wheat	cytosol, nucleus, plastid, vacuole	44.47	48.4
TraesCS3D01G373600.1	Wheat	mitochondrion	44.47	48.4
Os01t0869200-01	Rice	mitochondrion, plastid	45.37	48.09
HORVU3Hr1G082880.2	Barley	cytosol, mitochondrion, peroxisome, vacuole	45.15	47.73
TraesCS3A01G380500.1	Wheat	mitochondrion	43.79	47.55
VIT_03s0091g01190.t01	Wine grape	cytosol	51.69	45.71
Os04t0430900-00	Rice	cytosol, plastid	43.34	45.07
Zm00001d025416_P001	Maize	mitochondrion	39.95	44.47
KXG34188	Sorghum	plasma membrane	14.67	43.92
VIT_05s0020g04720.t01	Wine grape	cytosol, peroxisome, plasma membrane	36.57	41.65
VIT_07s0141g00590.t01	Wine grape	cytosol	35.44	40.36
VIT_09s0018g00600.t01	Wine grape	nucleus, peroxisome, plasma membrane	39.28	39.19
VIT_01s0011g00450.t01	Wine grape	cytosol, peroxisome, plasma membrane, plastid	36.79	38.72
VIT_09s0018g00570.t01	Wine grape	nucleus	20.32	38.46
VIT_12s0034g02550.t01	Wine grape	plastid	33.86	33.11
VIT_06s0061g01060.t01	Wine grape	plastid	20.54	20.4

Protein Annotations

Gene3D:1.20.58.340	EntrezGene:100249123	Gene3D:2.40.128.330	MapMan:24.3.3.1	ProteinID:CBI21632	ProteinID:CBI21632.3
ncoils:Coil	UniProt:D7SWI3	EMBL:FN595233	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575
GO:GO:0006810	GO:GO:0008150	GO:GO:0015095	GO:GO:0016020	GO:GO:0016021	GO:GO:1903830
PANTHER:PTHR13890	PANTHER:PTHR13890:SF9	TMHMM:TMhelix	UniParc:UPI0001BE20D2	ArrayExpress:VIT_07s0031g02820	EnsemblPlantsGene:VIT_07s0031g02820
EnsemblPlants:VIT_07s0031g02820.t01	RefSeq:XP_010652955.1	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr7:-:19390510..19413577

Molecular Weight (calculated)

49429.2 Da

IEP (calculated)

4.520

GRAVY (calculated)

-0.249

Length

443 amino acids

Sequence
(BLAST)

001: MVSKPNTEEE MAKFAIVPAQ TRRKGIGIRA WLVVLESGQS HLEELGKHSV MRRTGLPARD LRVLDPVLSY PSTILGRERA IVINLEHIKA IITAKEVLMV
101: NSNNPLIVQF VEDLQHRVMP KPAMESHDKE IEDAADANWG SPSVHGFNGS VTNSRKRPSQ RVNVSSEVLN VDVKEDSPKT SEDERVAAGP KVLPFEFRAL
201: EACLESACRC LESETQTLEQ EAYPALDELT SNISTLNLER VRQIKSRLVA ISGRVQKVRD ELEHLLDDDN DMAEMFLTEK LVRPSLDQSS IKEELCNDEL
301: EEDDERTEES KSESNSEIFS GFKPNVEELE MLLEAYFVQV DGILQKLSDM SEYVGDTEDF INIMLDDKQN QLLQMGVMLS TANMIINAGI VVVGLFGMNI
401: TISLFDGGPS TKFLETTLGT LGSCVALYLI AFVWGKKKKL LGS

Best Arabidopsis Sequence Match ( AT3G19640.1 )
(BLAST)

001: MRGARPDEFN FSTNPSTPNT GQPTPTYPAG VGGGGGGRKK GVGVRTWLVL NSSGQSEPKE EGKHSIMRRT GLPARDLRIL DPLLSYPSTV LGRERAIVIN
101: LEHIKAIITA QEVLLLNSKD PSVSPFIDEL QRRILCHHHA TKPQEEQNSG GEPHTRVDPA QGEAGTEQSS GDQGSEAKKD AKQSLENQDG SKVLPFEFVA
201: LEACLEAASS SLEHEALRLE LEAHPALDKL TSKISTLNLE RVRQIKSRLV AITGRVQKVR DELEHLLDDD EDMAEMYLTE KLAQKLEDSS NSSMNESDTF
301: EVDLPQGDED DRLPPEFASE ANRDGRYLQA NDAHELLMST QSALSRNSRG THTSSTRSAM TNKLDVEELE MLLEAYFVQI DGILNKLSTL REYVDDTEDY
401: INIMLDDKQN HLLQMGVMLT TATLVMSAFI AVAGVFGMNI TIELFTDNKH GPSRFIWTVI GGSIGSICLY VGAIGWCKYK RLLE

Arabidopsis Description

MRS2-3MRS2-3 [Source:UniProtKB/TrEMBL;Acc:A0A178VLJ7]
SUBAcon: [peroxisome,golgi,plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.