Factsheet for TraesCS3D01G373700.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 1
mitochondrion 3
plasma membrane 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	cytosol, mitochondrion, plasma membrane
iPSORT:	plastid
MultiLoc:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3B01G413200.1	Wheat	mitochondrion	97.28	97.28
TraesCS3A01G380600.1	Wheat	mitochondrion	96.79	96.79
HORVU3Hr1G082870.5	Barley	mitochondrion	94.32	94.09
TraesCS3D01G373600.1	Wheat	mitochondrion	84.2	83.78
Os01t0869200-01	Rice	mitochondrion, plastid	70.62	68.42
EES01822	Sorghum	mitochondrion	69.88	68.36
KRH59642	Soybean	cytosol	23.21	57.32
GSMUA_Achr5P26100_001	Banana	cytosol	57.28	52.85
GSMUA_Achr11P...	Banana	cytosol	56.3	51.35
TraesCS3D01G408500.1	Wheat	mitochondrion	55.56	50.0
KRH09687	Soybean	mitochondrion	36.3	47.57
KRH23620	Soybean	mitochondrion	47.9	46.75
VIT_07s0031g02820.t01	Wine grape	cytosol	50.37	46.05
CDY66275	Canola	cytosol, peroxisome, plasma membrane	49.63	45.58
Bra022441.1-P	Field mustard	cytosol	49.63	45.58
KRH40989	Soybean	mitochondrion	44.69	44.04
CDX95430	Canola	cytosol, golgi, peroxisome	48.64	43.3
Bra038223.1-P	Field mustard	cytosol, golgi, peroxisome	48.89	43.04
CDY42196	Canola	cytosol	48.15	42.76
AT3G19640.1	Thale cress	cytosol, golgi, peroxisome, plastid	50.12	41.94
TraesCS5D01G391700.1	Wheat	plastid	39.51	41.24
Solyc01g106900.2.1	Tomato	cytosol, peroxisome, plastid	48.64	39.56
PGSC0003DMT400066130	Potato	cytosol, peroxisome, plastid	48.4	39.36
TraesCS2D01G354900.2	Wheat	cytosol, nucleus, plasma membrane	38.77	36.68
TraesCS7D01G494700.1	Wheat	plastid	38.52	35.06
TraesCS1D01G208700.1	Wheat	mitochondrion	35.06	30.54
CDY58861	Canola	nucleus	49.63	27.53
TraesCS4D01G025300.1	Wheat	plastid	20.74	18.79

Protein Annotations

EnsemblPlants:TraesCS3D01G373700.1	EnsemblPlantsGene:TraesCS3D01G373700	Gene3D:1.20.58.340	Gene3D:2.40.128.330	ncoils:Coil	PANTHER:PTHR13890
PANTHER:PTHR13890:SF12	SEG:seg	TIGR:cd12823	TMHMM:TMhelix	MapMan:24.3.3.1	:

Description

No Description!

Coordinates

chr3D:+:487226552..487231500

Molecular Weight (calculated)

45398.2 Da

IEP (calculated)

4.643

GRAVY (calculated)

-0.358

Length

405 amino acids

Sequence
(BLAST)

001: MERRQPQTAP APRRKGAPAA SQEWLVVPAA GEESTGEFGR HRIMEITGLP ARDLRMLDPQ LSYPSTILGR DRAVVVNLEH VKAIVTAAEV LVRDPGNPRL
101: RPFLQELHAR LALPDASTTN PATDDMELGG DQGNVPMPGS AKIQPFEFKV LEVCLEHTCK CMESETLALE KEAYPALDKL TSKVSTLNLE HVRQIKSRLV
201: ELTGRVQKVR DDIEQLVDDD TDMSEMYLTR KLAFQRVDES SVKLDSNKHA SPDHEDEKEE EDSGDDIESS HASSAFVKPD VEELEMLLEA YFVQFDGTLN
301: KLCHLRDYVD DTEDYINMML DEKQNQLLQM GVMLTTATVV ITAGIVVVSL FGMNIHIELT LDPETPEMAR IKNRKFWETT WATVAGCAAI YILAIYAGKK
401: SKYLQ

Best Arabidopsis Sequence Match ( AT3G19640.1 )
(BLAST)

001: MRGARPDEFN FSTNPSTPNT GQPTPTYPAG VGGGGGGRKK GVGVRTWLVL NSSGQSEPKE EGKHSIMRRT GLPARDLRIL DPLLSYPSTV LGRERAIVIN
101: LEHIKAIITA QEVLLLNSKD PSVSPFIDEL QRRILCHHHA TKPQEEQNSG GEPHTRVDPA QGEAGTEQSS GDQGSEAKKD AKQSLENQDG SKVLPFEFVA
201: LEACLEAASS SLEHEALRLE LEAHPALDKL TSKISTLNLE RVRQIKSRLV AITGRVQKVR DELEHLLDDD EDMAEMYLTE KLAQKLEDSS NSSMNESDTF
301: EVDLPQGDED DRLPPEFASE ANRDGRYLQA NDAHELLMST QSALSRNSRG THTSSTRSAM TNKLDVEELE MLLEAYFVQI DGILNKLSTL REYVDDTEDY
401: INIMLDDKQN HLLQMGVMLT TATLVMSAFI AVAGVFGMNI TIELFTDNKH GPSRFIWTVI GGSIGSICLY VGAIGWCKYK RLLE

Arabidopsis Description

MRS2-3MRS2-3 [Source:UniProtKB/TrEMBL;Acc:A0A178VLJ7]
SUBAcon: [peroxisome,golgi,plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.