Factsheet for TraesCS2D01G354900.2

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, nucleus, cytosol

Predictor Summary:

cytosol 1
mitochondrion 1
plasma membrane 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, nucleus, plasma membrane
Any Predictor:	cytosol, mitochondrion, nucleus, plasma membrane
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2B01G375200.1	Wheat	cytosol, peroxisome, plasma membrane	99.07	99.07
TraesCS2A01G354100.1	Wheat	cytosol, peroxisome, plasma membrane	98.6	98.6
HORVU2Hr1G086400.6	Barley	cytosol	67.52	95.7
Os04t0501100-00	Rice	cytosol, plasma membrane	46.73	88.89
EES11075	Sorghum	cytosol, peroxisome, plasma membrane	89.02	86.39
Zm00001d003125_P001	Maize	cytosol, nucleus, plasma membrane, plastid	88.32	84.0
Bra035144.1-P	Field mustard	cytosol, peroxisome, plasma membrane	67.99	70.98
CDX88569	Canola	cytosol, peroxisome, plasma membrane	67.76	70.73
CDX87352	Canola	cytosol, peroxisome, plasma membrane	67.76	70.73
Bra008431.1-P	Field mustard	plasma membrane	61.22	70.62
GSMUA_Achr9P13370_001	Banana	mitochondrion	68.46	68.62
CDY22292	Canola	plastid	64.72	68.4
CDY35061	Canola	plastid	67.06	68.33
CDY49735	Canola	mitochondrion, peroxisome, plasma membrane, plastid	64.72	68.23
CDY33361	Canola	plastid	65.19	66.75
AT1G16010.2	Thale cress	plastid	68.93	66.74
KRH23679	Soybean	plastid	68.93	66.59
GSMUA_Achr10P...	Banana	mitochondrion	66.36	66.51
KRH09638	Soybean	plastid	68.69	66.37
PGSC0003DMT400073310	Potato	nucleus, peroxisome, plasma membrane, plastid	68.93	66.29
AT1G80900.1	Thale cress	cytosol, nucleus, peroxisome, plastid	68.22	65.91
Bra026085.1-P	Field mustard	plastid	68.46	65.84
TraesCS7D01G494700.1	Wheat	plastid	67.99	65.39
Solyc06g068490.2.1	Tomato	plastid	68.93	63.99
VIT_09s0018g00570.t01	Wine grape	nucleus	34.35	62.82
TraesCS5D01G391700.1	Wheat	plastid	39.72	43.81
TraesCS3D01G408500.1	Wheat	mitochondrion	40.89	38.89
TraesCS3D01G373700.1	Wheat	mitochondrion	36.68	38.77
TraesCS3D01G373600.1	Wheat	mitochondrion	35.28	37.1
TraesCS1D01G208700.1	Wheat	mitochondrion	35.28	32.47
TraesCS4D01G025300.1	Wheat	plastid	21.26	20.36

Protein Annotations

EnsemblPlants:TraesCS2D01G354900.2	EnsemblPlantsGene:TraesCS2D01G354900	Gene3D:1.20.58.340	Gene3D:2.40.128.330	ncoils:Coil	PANTHER:PTHR13890
PANTHER:PTHR13890:SF10	SEG:seg	SUPFAM:SSF144083	TIGR:cd12823	TMHMM:TMhelix	MapMan:24.3.3.1

Description

No Description!

Coordinates

chr2D:+:455890239..455894082

Molecular Weight (calculated)

47410.1 Da

IEP (calculated)

4.997

GRAVY (calculated)

-0.082

Length

428 amino acids

Sequence
(BLAST)

001: MDQDPKERLL LPPRAATNGP HRRGKPAAPG GGGGGGGVTI DVHGLKKRGG GRRSWVRVDA ATGAAEAVEV AKPALMRRLD LPARDLRLLD PLFVYPSAIL
101: GRERAVVCNL ERIRCIITAD EALVLRDPDA DGGAAAEEAV RRYVDELQRR LVDRADDLPF EFIALEVALE AACSFLDAQA VELEAEAYPL LDELTAKIST
201: LDLERARRLK SKLVALTRRV QKVRDEIEQL MDDDGDMAEM YLTEKKMRME ASSLDEEGLQ GIAGNNAFGT SVSAPVSPVS SPPAPRRLEK QFSFARSRHS
301: SFKSSESSQY NIEELEMLLE AYFVVIDYTL SKLTSLKEYI DDTEDFINIQ LDNVRNQLIQ FELLLTTATF VVAIFGVVSG VFGMNFEGVA VLKVPHAFEW
401: TLIITGVCGA VIFACLLWYF KKRRFFPL

Best Arabidopsis Sequence Match ( AT1G16010.2 )
(BLAST)

001: MSELKERLLP PRPASAMNLR DASVTRPSAS GRPPLLGVDV LGLKKRGQGL RSWIRVDTSG NTQVMEVDKF TMMRRCDLPA RDLRLLDPLF VYPSTILGRE
101: KAIVVNLEQI RCIITADEVL LLNSLDNYVL RYVVELQQRL KTSSVGEMWQ QENSQLSRRR SRSFDNAFEN SSPDYLPFEF RALEIALEAA CTFLDSQASE
201: LEIEAYPLLD ELTSKISTLN LERVRRLKSR LVALTRRVQK VRDEIEQLMD DDGDMAEMYL TEKKRRMEGS MYGDQSLLGY RSNDGLSVSA PVSPVSSPPD
301: SRRLDKSLSI ARSRHDSARS SEGAENIEEL EMLLEAYFVV IDSTLNKLTS LKEYIDDTED FINIQLDNVR NQLIQFELLL TTATFVVAIF GVVAGIFGMN
401: FEIDFFNQPG AFRWVLIITG VCGFVIFSAF VWFFKYRRLM PL

Arabidopsis Description

MRS2-1Magnesium transporter MRS2-1 [Source:UniProtKB/Swiss-Prot;Acc:Q9S9N4]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.