CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 2
plastid 2
mitochondrion 1
plasma membrane 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH09638	Soybean	plastid	98.65	98.65
PGSC0003DMT400073310	Potato	nucleus, peroxisome, plasma membrane, plastid	88.04	87.64
VIT_09s0018g00600.t01	Wine grape	nucleus, peroxisome, plasma membrane	86.0	85.81
AT1G16010.2	Thale cress	plastid	85.33	85.52
CDY35061	Canola	plastid	81.04	85.48
Bra026085.1-P	Field mustard	plastid	85.33	84.94
CDY33361	Canola	plastid	79.91	84.69
Solyc06g068490.2.1	Tomato	plastid	88.04	84.6
Bra008431.1-P	Field mustard	plasma membrane	70.65	84.37
OQU76793	Sorghum	endoplasmic reticulum, peroxisome	65.91	83.91
CDY22292	Canola	plastid	76.07	83.21
CDX88569	Canola	cytosol, peroxisome, plasma membrane	76.98	83.17
CDY49735	Canola	mitochondrion, peroxisome, plasma membrane, plastid	76.07	83.0
CDX87352	Canola	cytosol, peroxisome, plasma membrane	76.75	82.93
TraesCS7B01G414200.1	Wheat	endoplasmic reticulum, plasma membrane	65.01	82.76
Bra035144.1-P	Field mustard	cytosol, peroxisome, plasma membrane	76.52	82.68
AT1G80900.1	Thale cress	cytosol, nucleus, peroxisome, plastid	82.62	82.62
GSMUA_Achr9P13370_001	Banana	mitochondrion	77.88	80.8
GSMUA_Achr10P...	Banana	mitochondrion	75.39	78.22
Zm00001d000430_P001	Maize	plastid	72.23	74.77
Zm00001d036714_P002	Maize	plastid	72.46	74.65
Os06t0650800-01	Rice	plasma membrane	73.14	74.31
HORVU2Hr1G086400.6	Barley	cytosol	49.21	72.19
HORVU7Hr1G113400.9	Barley	plastid	71.56	71.88
TraesCS7A01G506600.1	Wheat	plastid	71.56	71.56
TraesCS7D01G494700.1	Wheat	plastid	71.78	71.46
TraesCS2A01G354100.1	Wheat	cytosol, peroxisome, plasma membrane	66.82	69.16
TraesCS2D01G354900.2	Wheat	cytosol, nucleus, plasma membrane	66.59	68.93
TraesCS2B01G375200.1	Wheat	cytosol, peroxisome, plasma membrane	66.59	68.93
EES11075	Sorghum	cytosol, peroxisome, plasma membrane	65.69	65.99
Os04t0501100-00	Rice	cytosol, plasma membrane	32.73	64.44
Zm00001d003125_P001	Maize	cytosol, nucleus, plasma membrane, plastid	65.24	64.22
KRH70907	Soybean	cytosol, nucleus, plasma membrane	54.4	58.21
KRH59642	Soybean	cytosol	19.19	51.83
KRH77919	Soybean	cytosol	44.24	49.87
KRH27585	Soybean	cytosol	43.34	48.12
KRH34378	Soybean	cytosol, peroxisome, plastid	42.21	47.95
KRG92427	Soybean	cytosol, peroxisome, plasma membrane	42.21	47.34
KRG95626	Soybean	cytosol	40.86	46.65
KRH67301	Soybean	cytosol	40.63	46.39
KRH09687	Soybean	mitochondrion	29.35	42.07
KRH33492	Soybean	cytosol	20.32	39.3
KRH23620	Soybean	mitochondrion	36.79	39.28
KRH40989	Soybean	mitochondrion	36.34	39.17
KRH59146	Soybean	plastid	37.92	37.25
KRH43038	Soybean	plastid	37.7	37.11
KRH22756	Soybean	mitochondrion, plastid	21.9	21.27
KRH26555	Soybean	plastid	21.9	21.23

Protein Annotations

Gene3D:1.20.58.340	EntrezGene:100801387	Gene3D:2.40.128.330	MapMan:24.3.3.1	EMBL:ACUP02008482	ncoils:Coil
EnsemblPlantsGene:GLYMA_13G370900	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0006810	GO:GO:0008150
GO:GO:0015095	GO:GO:0016020	GO:GO:0016021	GO:GO:1903830	UniProt:I1M5Z6	ProteinID:KRH23678.1
EnsemblPlants:KRH23679	ProteinID:KRH23679	ProteinID:KRH23679.1	SUPFAM:SSF144083	TMHMM:TMhelix	UniParc:UPI000233B81D
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr13:-:45618183..45622734

Molecular Weight (calculated)

50428.8 Da

IEP (calculated)

4.857

GRAVY (calculated)

-0.080

Length

443 amino acids

Sequence
(BLAST)

001: MADLKERLLP PKPASALNVR EVANRPSASG RQAFQGVDVL GLKKRGQGLR SWIRVDTSGN SQAIEVDKFT MMRRCDLPAR DLRLLDPLFV YPSTILGREK
101: AIVVNLEQIR CIITADEVLL LNSLDSYVLH YVMELQRRLT TTGVGEVWQS DSSDMNRRRG SRNFENVFSN SSPDYLPFEF RALEVALEAA CTFLDSQAAE
201: LEIEAYPLLD ELTSKISTLN LERVRRLKSR LVALTRRVQK VRDEIEQLMD DDGDMAEMYL TEKKRRMELS FYGDQSMVGY KSVDGASISA PVSPVSSPLD
301: SRKLEKCFSI ARSRHESMRS SESTTESIEE LEMLLEAYFV VIDSTLNKLT SLKEYIDDTE DFINIQLDNV RNQLIQFELL LTTATFVVAI FGVVAGIFGM
401: NFEIELFDVP SAFQWVLIIT GVCGVFIFSA FVWFFKYRRL MPL

Best Arabidopsis Sequence Match ( AT1G16010.2 )
(BLAST)

001: MSELKERLLP PRPASAMNLR DASVTRPSAS GRPPLLGVDV LGLKKRGQGL RSWIRVDTSG NTQVMEVDKF TMMRRCDLPA RDLRLLDPLF VYPSTILGRE
101: KAIVVNLEQI RCIITADEVL LLNSLDNYVL RYVVELQQRL KTSSVGEMWQ QENSQLSRRR SRSFDNAFEN SSPDYLPFEF RALEIALEAA CTFLDSQASE
201: LEIEAYPLLD ELTSKISTLN LERVRRLKSR LVALTRRVQK VRDEIEQLMD DDGDMAEMYL TEKKRRMEGS MYGDQSLLGY RSNDGLSVSA PVSPVSSPPD
301: SRRLDKSLSI ARSRHDSARS SEGAENIEEL EMLLEAYFVV IDSTLNKLTS LKEYIDDTED FINIQLDNVR NQLIQFELLL TTATFVVAIF GVVAGIFGMN
401: FEIDFFNQPG AFRWVLIITG VCGFVIFSAF VWFFKYRRLM PL

Arabidopsis Description

MRS2-1Magnesium transporter MRS2-1 [Source:UniProtKB/Swiss-Prot;Acc:Q9S9N4]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.