Factsheet for PGSC0003DMT400073310

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, plastid, nucleus, plasma membrane

Predictor Summary:

nucleus 3
plastid 2
cytosol 1
mitochondrion 1
plasma membrane 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc06g068490.2.1	Tomato	plastid	99.78	96.31
VIT_09s0018g00600.t01	Wine grape	nucleus, peroxisome, plasma membrane	88.09	88.29
KRH09638	Soybean	plastid	87.87	88.26
KRH23679	Soybean	plastid	87.64	88.04
Bra008431.1-P	Field mustard	plasma membrane	72.13	86.52
AT1G16010.2	Thale cress	plastid	85.62	86.2
CDY35061	Canola	plastid	80.45	85.24
CDY33361	Canola	plastid	79.78	84.93
AT1G80900.1	Thale cress	cytosol, nucleus, peroxisome, plastid	84.49	84.88
Bra026085.1-P	Field mustard	plastid	84.72	84.72
CDY22292	Canola	plastid	77.08	84.69
CDY49735	Canola	mitochondrion, peroxisome, plasma membrane, plastid	77.08	84.48
CDX88569	Canola	cytosol, peroxisome, plasma membrane	77.75	84.39
CDX87352	Canola	cytosol, peroxisome, plasma membrane	77.08	83.66
Bra035144.1-P	Field mustard	cytosol, peroxisome, plasma membrane	77.08	83.66
OQU76793	Sorghum	endoplasmic reticulum, peroxisome	65.39	83.62
TraesCS7B01G414200.1	Wheat	endoplasmic reticulum, plasma membrane	64.72	82.76
GSMUA_Achr9P13370_001	Banana	mitochondrion	77.98	81.26
GSMUA_Achr10P...	Banana	mitochondrion	75.96	79.16
Zm00001d000430_P001	Maize	plastid	71.91	74.77
Zm00001d036714_P002	Maize	plastid	71.46	73.95
HORVU2Hr1G086400.6	Barley	cytosol	50.11	73.84
Os06t0650800-01	Rice	plasma membrane	72.13	73.62
HORVU7Hr1G113400.9	Barley	plastid	70.79	71.43
TraesCS7A01G506600.1	Wheat	plastid	71.01	71.33
TraesCS7D01G494700.1	Wheat	plastid	71.01	71.01
TraesCS2D01G354900.2	Wheat	cytosol, nucleus, plasma membrane	66.29	68.93
TraesCS2A01G354100.1	Wheat	cytosol, peroxisome, plasma membrane	66.07	68.69
TraesCS2B01G375200.1	Wheat	cytosol, peroxisome, plasma membrane	66.07	68.69
EES11075	Sorghum	cytosol, peroxisome, plasma membrane	66.07	66.67
Zm00001d003125_P001	Maize	cytosol, nucleus, plasma membrane, plastid	65.39	64.67
Os04t0501100-00	Rice	cytosol, plasma membrane	32.36	64.0
PGSC0003DMT400072765	Potato	cytosol, peroxisome, plasma membrane	24.49	55.05
PGSC0003DMT400038981	Potato	mitochondrion	40.45	47.75
PGSC0003DMT400038974	Potato	cytosol	15.28	46.58
PGSC0003DMT400066130	Potato	cytosol, peroxisome, plastid	46.74	41.77
PGSC0003DMT400064171	Potato	nucleus	37.3	38.43
PGSC0003DMT400001226	Potato	mitochondrion	17.53	19.9

Protein Annotations

Gene3D:1.20.58.340	EntrezGene:102581897	Gene3D:2.40.128.330	MapMan:24.3.3.1	ncoils:Coil	GO:GO:0003674
GO:GO:0005215	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005773
GO:GO:0006810	GO:GO:0008150	GO:GO:0015095	GO:GO:0016020	GO:GO:0016021	GO:GO:0030001
GO:GO:0046873	GO:GO:0055085	GO:GO:1903830	UniProt:M1CRS8	InterPro:MgTranspt_CorA/ZnTranspt_ZntB	PFAM:PF01544
EnsemblPlantsGene:PGSC0003DMG401028489	PGSC:PGSC0003DMG401028489	EnsemblPlants:PGSC0003DMT400073310	PANTHER:PTHR13890	PANTHER:PTHR13890:SF10	SUPFAM:SSF144083
TMHMM:TMhelix	UniParc:UPI000295BB07	RefSeq:XP_006356254.1	SEG:seg	:	:

Description

RNA splicing protein mrs2, mitochondrial [Source:PGSC_GENE;Acc:PGSC0003DMG401028489]

Coordinates

chr6:-:50121170..50127074

Molecular Weight (calculated)

50581.2 Da

IEP (calculated)

4.930

GRAVY (calculated)

-0.128

Length

445 amino acids

Sequence
(BLAST)

001: MAEIKERLLP PKPASAANLR EVSYRPPTSG RQPFQGIDVL GLKKRGQGLR SWIRVDTSGN SQVIEVDKFT MMRRCDLPAR DLRLLDPLFV YPSTILGREK
101: AIVVNLEQIR CIITADEVLL LNSLDSYVLQ YVVELQRRLQ AAGAGEVWQS EGELSRRRGG RNIENMFGNP SPDYLPFEFR ALEVALEAAC TFLDSQAAEL
201: EIEAYPLLDE LTSKISTLNL ERVRRLKSRL VALTRRVQKV RDEIEQLMDD DGDMAEMYLT EKKRRMELSC YGDQSLLGYR STDGALSLSA PVSPVSSPPE
301: SRRLEKSLSI ARSRHESMRS SESGTETQSI EELEMLLEAY FVVIDSTLNK LTSLKEYIDD TEDFINIQLD NVRNQLIQFE LLLTTATFVV AIFGVVAGIF
401: GMNFEIPMFN EPTAFKWVLI ITGVTGAVIF FAFLWFFKYR RLMPL

Best Arabidopsis Sequence Match ( AT1G16010.2 )
(BLAST)

001: MSELKERLLP PRPASAMNLR DASVTRPSAS GRPPLLGVDV LGLKKRGQGL RSWIRVDTSG NTQVMEVDKF TMMRRCDLPA RDLRLLDPLF VYPSTILGRE
101: KAIVVNLEQI RCIITADEVL LLNSLDNYVL RYVVELQQRL KTSSVGEMWQ QENSQLSRRR SRSFDNAFEN SSPDYLPFEF RALEIALEAA CTFLDSQASE
201: LEIEAYPLLD ELTSKISTLN LERVRRLKSR LVALTRRVQK VRDEIEQLMD DDGDMAEMYL TEKKRRMEGS MYGDQSLLGY RSNDGLSVSA PVSPVSSPPD
301: SRRLDKSLSI ARSRHDSARS SEGAENIEEL EMLLEAYFVV IDSTLNKLTS LKEYIDDTED FINIQLDNVR NQLIQFELLL TTATFVVAIF GVVAGIFGMN
401: FEIDFFNQPG AFRWVLIITG VCGFVIFSAF VWFFKYRRLM PL

Arabidopsis Description

MRS2-1Magnesium transporter MRS2-1 [Source:UniProtKB/Swiss-Prot;Acc:Q9S9N4]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.