CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, peroxisome

Predictor Summary:

nucleus 1
peroxisome 2
mitochondrion 2
extracellular 1
endoplasmic reticulum 2
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, peroxisome
Any Predictor:	mitochondrion, nucleus, peroxisome, secretory
BaCelLo:	nucleus
MultiLoc:	peroxisome
Predotar:	secretory
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	endoplasmic reticulum
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7B01G414200.1	Wheat	endoplasmic reticulum, plasma membrane	93.68	93.68
Zm00001d036714_P002	Maize	plastid	98.85	80.0
Zm00001d000430_P001	Maize	plastid	97.7	79.44
Bra008431.1-P	Field mustard	plasma membrane	81.61	76.55
Os06t0650800-01	Rice	plasma membrane	93.97	75.0
HORVU7Hr1G113400.9	Barley	plastid	93.39	73.7
TraesCS7A01G506600.1	Wheat	plastid	93.68	73.59
TraesCS7D01G494700.1	Wheat	plastid	93.68	73.26
GSMUA_Achr9P13370_001	Banana	mitochondrion	85.06	69.32
Bra035144.1-P	Field mustard	cytosol, peroxisome, plasma membrane	80.75	68.54
CDX87352	Canola	cytosol, peroxisome, plasma membrane	80.46	68.29
CDX88569	Canola	cytosol, peroxisome, plasma membrane	80.46	68.29
GSMUA_Achr10P...	Banana	mitochondrion	83.05	67.68
VIT_09s0018g00570.t01	Wine grape	nucleus	45.4	67.52
KRH23679	Soybean	plastid	83.91	65.91
CDY35061	Canola	plastid	79.31	65.71
KRH09638	Soybean	plastid	83.62	65.69
CDY22292	Canola	plastid	76.15	65.43
PGSC0003DMT400073310	Potato	nucleus, peroxisome, plasma membrane, plastid	83.62	65.39
CDY49735	Canola	mitochondrion, peroxisome, plasma membrane, plastid	76.15	65.27
CDY33361	Canola	plastid	77.3	64.35
AT1G16010.2	Thale cress	plastid	81.32	64.03
Bra026085.1-P	Field mustard	plastid	81.32	63.6
Solyc06g068490.2.1	Tomato	plastid	83.91	63.34
AT1G80900.1	Thale cress	cytosol, nucleus, peroxisome, plastid	80.17	62.98
EES11075	Sorghum	cytosol, peroxisome, plasma membrane	72.99	57.6
EER90897	Sorghum	cytosol	49.14	44.19
KXG25477	Sorghum	plastid	39.08	37.88
OQU81611	Sorghum	peroxisome, plasma membrane, plastid	13.79	37.8
EES04071	Sorghum	mitochondrion	47.41	37.25
EES01822	Sorghum	mitochondrion	41.67	35.02
EES10822	Sorghum	mitochondrion	41.38	34.2
KXG34188	Sorghum	plasma membrane	14.37	33.78
EER91996	Sorghum	mitochondrion	40.8	29.71
OQU93276	Sorghum	plastid	33.33	26.85
OQU91190	Sorghum	plastid	24.71	18.57

Protein Annotations

EnsemblPlants:OQU76793	EnsemblPlantsGene:SORBI_3010G210500	Gene3D:1.20.58.340	Gene3D:2.40.128.330	GO:GO:0005575	GO:GO:0016020
GO:GO:0016021	ncoils:Coil	PANTHER:PTHR13890	PANTHER:PTHR13890:SF10	ProteinID:OQU76793	ProteinID:OQU76793.1
SEG:seg	SUPFAM:SSF144083	TMHMM:TMhelix	UniParc:UPI0009DC8D1C	UniProt:A0A1W0VU29	MapMan:24.3.3.1

Description

hypothetical protein

Coordinates

chr10:-:55405378..55409126

Molecular Weight (calculated)

39626.9 Da

IEP (calculated)

4.543

GRAVY (calculated)

0.066

Length

348 amino acids

Sequence
(BLAST)

001: MMRRCELPAR DLRLLDPLFV YPSTVLGRER AIVVNLEQIR CVITADEVLL LNSLDSYVLQ YAAELQRRLL QRAEGDELPF EFRALELALE AACSFLDAQA
101: AELEIEAYPL LDELTSKIST LNLERVRRLK SRLVALTRRV QKVRDEIEQL MDDDGDMAEM YLTEKKMRME SSVFGDQSLL GYNSAGAAGT SVSAPVSPVS
201: SPTESRKLEK AFSLCRSRHD STKSSDNTTT EHIQELEMLL EAYFVVIDST LNKLTSLKEY IDDTEDFINI QLDNVRNQLI QFELLLTTAT FVVAIFGVVA
301: GIFGMNFETS VFKIENAFQW VLVITSVVGV FIFCSFLWFF KYKRLMPL

Best Arabidopsis Sequence Match ( AT1G16010.2 )
(BLAST)

001: MSELKERLLP PRPASAMNLR DASVTRPSAS GRPPLLGVDV LGLKKRGQGL RSWIRVDTSG NTQVMEVDKF TMMRRCDLPA RDLRLLDPLF VYPSTILGRE
101: KAIVVNLEQI RCIITADEVL LLNSLDNYVL RYVVELQQRL KTSSVGEMWQ QENSQLSRRR SRSFDNAFEN SSPDYLPFEF RALEIALEAA CTFLDSQASE
201: LEIEAYPLLD ELTSKISTLN LERVRRLKSR LVALTRRVQK VRDEIEQLMD DDGDMAEMYL TEKKRRMEGS MYGDQSLLGY RSNDGLSVSA PVSPVSSPPD
301: SRRLDKSLSI ARSRHDSARS SEGAENIEEL EMLLEAYFVV IDSTLNKLTS LKEYIDDTED FINIQLDNVR NQLIQFELLL TTATFVVAIF GVVAGIFGMN
401: FEIDFFNQPG AFRWVLIITG VCGFVIFSAF VWFFKYRRLM PL

Arabidopsis Description

MRS2-1Magnesium transporter MRS2-1 [Source:UniProtKB/Swiss-Prot;Acc:Q9S9N4]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.