CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, cytosol, plasma membrane

Predictor Summary:

nucleus 1
cytosol 1
plastid 1
plasma membrane 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, peroxisome, plasma membrane
Any Predictor:	cytosol, nucleus, peroxisome
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	plastid
WoLF PSORT:	plasma membrane
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra035144.1-P	Field mustard	cytosol, peroxisome, plasma membrane	98.54	98.54
CDX88569	Canola	cytosol, peroxisome, plasma membrane	97.56	97.56
CDY22292	Canola	plastid	85.12	86.17
CDY49735	Canola	mitochondrion, peroxisome, plasma membrane, plastid	85.12	85.96
AT1G80900.1	Thale cress	cytosol, nucleus, peroxisome, plastid	90.0	83.3
CDY35061	Canola	plastid	83.66	81.67
TraesCS7B01G414200.1	Wheat	endoplasmic reticulum, plasma membrane	68.29	80.46
OQU76793	Sorghum	endoplasmic reticulum, peroxisome	68.29	80.46
CDY33361	Canola	plastid	81.95	80.38
PGSC0003DMT400073310	Potato	nucleus, peroxisome, plasma membrane, plastid	83.66	77.08
KRH23679	Soybean	plastid	82.93	76.75
KRH09638	Soybean	plastid	82.93	76.75
VIT_09s0018g00600.t01	Wine grape	nucleus, peroxisome, plasma membrane	82.93	76.58
GSMUA_Achr9P13370_001	Banana	mitochondrion	79.51	76.35
GSMUA_Achr10P...	Banana	mitochondrion	77.8	74.71
Solyc06g068490.2.1	Tomato	plastid	83.66	74.4
HORVU2Hr1G086400.6	Barley	cytosol	53.66	72.85
Zm00001d000430_P001	Maize	plastid	74.88	71.73
Os06t0650800-01	Rice	plasma membrane	75.61	71.1
Zm00001d036714_P002	Maize	plastid	74.39	70.93
HORVU7Hr1G113400.9	Barley	plastid	74.63	69.39
TraesCS7A01G506600.1	Wheat	plastid	74.63	69.07
TraesCS7D01G494700.1	Wheat	plastid	74.88	68.99
TraesCS2A01G354100.1	Wheat	cytosol, peroxisome, plasma membrane	71.22	68.22
TraesCS2D01G354900.2	Wheat	cytosol, nucleus, plasma membrane	70.73	67.76
TraesCS2B01G375200.1	Wheat	cytosol, peroxisome, plasma membrane	70.49	67.52
EES11075	Sorghum	cytosol, peroxisome, plasma membrane	70.49	65.53
Zm00001d003125_P001	Maize	cytosol, nucleus, plasma membrane, plastid	69.76	63.56
Os04t0501100-00	Rice	cytosol, plasma membrane	33.17	60.44
CDY51207	Canola	cytosol, nucleus, peroxisome	55.37	53.92
CDY36615	Canola	cytosol, nucleus, peroxisome	55.12	53.68
CDY02984	Canola	cytosol, peroxisome, plasma membrane	55.12	53.68
CDX81228	Canola	cytosol, mitochondrion, plastid	43.66	48.38
CDY51292	Canola	cytosol, peroxisome, plastid	44.39	48.15
CDY64845	Canola	mitochondrion, peroxisome, plastid	42.93	48.09
CDY56489	Canola	cytosol, peroxisome, plastid	44.15	47.88
CDY18706	Canola	cytosol, mitochondrion, plastid	43.41	46.35
CDY64844	Canola	cytosol	43.9	46.27
CDX85800	Canola	cytosol	43.9	46.27
CDY46811	Canola	cytosol	41.22	45.07
CDY66275	Canola	cytosol, peroxisome, plasma membrane	47.32	43.99
CDY31314	Canola	cytosol	40.98	43.75
CDX95430	Canola	cytosol, golgi, peroxisome	47.07	42.42
CDY42196	Canola	cytosol	46.59	41.89
CDY33715	Canola	cytosol	33.17	36.66
CDX92290	Canola	cytosol, mitochondrion, nucleus, plastid	37.07	36.19
CDY39718	Canola	cytosol	33.17	35.98
CDY65607	Canola	plastid	37.56	35.9
CDX99295	Canola	cytosol, mitochondrion, nucleus, plastid	36.59	35.8
CDY49260	Canola	plastid	37.07	35.43
CDY58861	Canola	nucleus	47.32	26.58
CDY26960	Canola	plastid	23.17	20.74
CDX92333	Canola	plastid	23.17	20.43

Protein Annotations

Gene3D:1.20.58.340	Gene3D:2.40.128.330	MapMan:24.3.3.1	GO:A0A078DE62	EnsemblPlants:CDX87352	ProteinID:CDX87352
ProteinID:CDX87352.1	ncoils:Coil	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0006810
GO:GO:0008150	GO:GO:0016020	GO:GO:0030001	GO:GO:0046873	GO:GO:0055085	EnsemblPlantsGene:GSBRNA2T00146320001
InterPro:MgTranspt_CorA/ZnTranspt_ZntB	PFAM:PF01544	PANTHER:PTHR13890	PANTHER:PTHR13890:SF10	SUPFAM:SSF144083	TMHMM:TMhelix
UniParc:UPI0004EF45F6	SEG:seg	:	:	:	:

Description

BnaA07g35210D

Coordinates

chrLK031850:-:253080..254765

Molecular Weight (calculated)

46336.9 Da

IEP (calculated)

4.580

GRAVY (calculated)

-0.070

Length

410 amino acids

Sequence
(BLAST)

001: MSDLKDRLLP PPLRGDSFSR PSSSGRQPLL GLDVSGLKKR GQGLKSWIRV DTFANTQLIE VDKFSMMRRC DLPARDLRLL DPLFVYPSTI LGRERAIVVN
101: LEQIRCIITA DEVLLLNSLD DYVLGYVVEL QQRLKASSVG DTSPDYLPFE FRALEVALEA ACTFLDAQAS ELEIEAYPLL DELTSKISTV NLERVRRLKS
201: RLVALTRRVQ KVRDEIEQLM DDDGDMAEMY LTEKKKRLEG SLYGDQSLPN DGVSFSAPVS PVSSPPSSRR LEKSLSFARS RPDSAKSSES ENENIEELEM
301: LLEAYFVVID STLNKLTSLK EYIDDTEDFI NIQLDNVRNQ LIQFELLLTT ATFVVAIFGV VAGIFGMNFE IDLFEQPGAF KWVLTITGVC GVLVFLGFLW
401: FYKSRRLMPL

Best Arabidopsis Sequence Match ( AT1G16010.1 )
(BLAST)

001: MSELKERLLP PRPASAMNLR DASVTRPSAS GRPPLLGVDV LGLKKRGQGL RSWIRVDTSG NTQVMEVDKF TMMRRCDLPA RDLRLLDPLF VYPSTILGRE
101: KAIVVNLEQI RCIITADEVL LLNSLDNYVL RYVVELQQRL KTSSVGEMWQ QENSQLSRRR SRSFDNAFEN SSPDYLPFEF RALEIALEAA CTFLDSQASE
201: LEIEAYPLLD ELTSKISTLN LERVRRLKSR LVALTRRVQK VRDEIEQLMD DDGDMAEMYL TEKKRRMEGS MYGDQSLLGY RSNDGLSVSA PVSPVSSPPD
301: SRRLDKSLSI ARSRHDSARS SEGAENIEEL EMLLEAYFVV IDSTLNKLTS LKEYIDDTED FINIQLDNVR NQLIQFELLL TTATFVVAIF GVVAGIFGMN
401: FEIDFFNQPG AFRWVLIITG VCGFVIFSAF VWFFKYRRLM PL

Arabidopsis Description

MRS2-1Magnesium transporter MRS2-1 [Source:UniProtKB/Swiss-Prot;Acc:Q9S9N4]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.