CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, peroxisome, plastid, plasma membrane

Predictor Summary:

nucleus 1
plastid 1
mitochondrion 2
plasma membrane 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY22292	Canola	plastid	99.75	100.0
Bra008431.1-P	Field mustard	plasma membrane	82.27	90.03
CDX88569	Canola	cytosol, peroxisome, plasma membrane	86.7	85.85
CDX87352	Canola	cytosol, peroxisome, plasma membrane	85.96	85.12
CDY35061	Canola	plastid	87.93	85.0
CDY33361	Canola	plastid	87.44	84.93
AT1G80900.1	Thale cress	cytosol, nucleus, peroxisome, plastid	91.87	84.2
PGSC0003DMT400073310	Potato	nucleus, peroxisome, plasma membrane, plastid	84.48	77.08
OQU76793	Sorghum	endoplasmic reticulum, peroxisome	65.27	76.15
KRH23679	Soybean	plastid	83.0	76.07
KRH09638	Soybean	plastid	82.76	75.85
TraesCS7B01G414200.1	Wheat	endoplasmic reticulum, plasma membrane	64.78	75.57
VIT_09s0018g00600.t01	Wine grape	nucleus, peroxisome, plasma membrane	82.02	75.0
Solyc06g068490.2.1	Tomato	plastid	84.48	74.4
GSMUA_Achr9P13370_001	Banana	mitochondrion	76.11	72.37
GSMUA_Achr10P...	Banana	mitochondrion	73.4	69.79
Zm00001d000430_P001	Maize	plastid	71.92	68.22
Zm00001d036714_P002	Maize	plastid	71.43	67.44
HORVU2Hr1G086400.6	Barley	cytosol	50.0	67.22
Os06t0650800-01	Rice	plasma membrane	71.92	66.97
HORVU7Hr1G113400.9	Barley	plastid	71.67	65.99
TraesCS7D01G494700.1	Wheat	plastid	71.92	65.62
TraesCS7A01G506600.1	Wheat	plastid	71.43	65.46
TraesCS2A01G354100.1	Wheat	cytosol, peroxisome, plasma membrane	68.23	64.72
TraesCS2D01G354900.2	Wheat	cytosol, nucleus, plasma membrane	68.23	64.72
TraesCS2B01G375200.1	Wheat	cytosol, peroxisome, plasma membrane	67.98	64.49
EES11075	Sorghum	cytosol, peroxisome, plasma membrane	67.24	61.9
Zm00001d003125_P001	Maize	cytosol, nucleus, plasma membrane, plastid	66.5	60.0
Os04t0501100-00	Rice	cytosol, plasma membrane	30.79	55.56
CDY51207	Canola	cytosol, nucleus, peroxisome	52.22	50.36
CDY02984	Canola	cytosol, peroxisome, plasma membrane	51.97	50.12
CDY36615	Canola	cytosol, nucleus, peroxisome	51.97	50.12
CDY64845	Canola	mitochondrion, peroxisome, plastid	40.39	44.81
CDY51292	Canola	cytosol, peroxisome, plastid	41.63	44.71
CDY56489	Canola	cytosol, peroxisome, plastid	41.38	44.44
CDX81228	Canola	cytosol, mitochondrion, plastid	39.9	43.78
CDX85800	Canola	cytosol	41.38	43.19
CDY64844	Canola	cytosol	41.38	43.19
CDY18706	Canola	cytosol, mitochondrion, plastid	39.9	42.19
CDY46811	Canola	cytosol	37.93	41.07
CDY66275	Canola	cytosol, peroxisome, plasma membrane	44.58	41.04
CDY31314	Canola	cytosol	37.68	39.84
CDX95430	Canola	cytosol, golgi, peroxisome	43.84	39.12
CDY42196	Canola	cytosol	43.1	38.38
CDY33715	Canola	cytosol	31.03	33.96
CDX92290	Canola	cytosol, mitochondrion, nucleus, plastid	34.73	33.57
CDY65607	Canola	plastid	35.47	33.57
CDX99295	Canola	cytosol, mitochondrion, nucleus, plastid	34.48	33.41
CDY39718	Canola	cytosol	31.03	33.33
CDY49260	Canola	plastid	34.98	33.1
CDY58861	Canola	nucleus	44.34	24.66
CDY26960	Canola	plastid	21.43	19.0
CDX92333	Canola	plastid	21.67	18.92

Protein Annotations

Gene3D:1.20.58.340	Gene3D:2.40.128.330	MapMan:24.3.3.1	GO:A0A078IFP8	UniProt:A0A078IFP8	EnsemblPlants:CDY49735
ProteinID:CDY49735	ProteinID:CDY49735.1	ncoils:Coil	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575
GO:GO:0006810	GO:GO:0008150	GO:GO:0016020	GO:GO:0016021	GO:GO:0030001	GO:GO:0046873
GO:GO:0055085	EnsemblPlantsGene:GSBRNA2T00093730001	InterPro:MgTranspt_CorA/ZnTranspt_ZntB	PFAM:PF01544	PANTHER:PTHR13890	PANTHER:PTHR13890:SF10
SUPFAM:SSF144083	TMHMM:TMhelix	UniParc:UPI0004EF42BC	SEG:seg	:	:

Description

BnaA02g19370DBnaA02g19370D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IFP8]

Coordinates

chrLK032856:-:8646..10779

Molecular Weight (calculated)

45966.5 Da

IEP (calculated)

5.409

GRAVY (calculated)

-0.136

Length

406 amino acids

Sequence
(BLAST)

001: MSDLKERLLP PRPASAINLR GEAAASRPSA SGRQPLLGVD VSGLKKRGQG LKSWIRVDTF ANTQVIEVDK FSMMRRCDLP ARDLRLLDPL FVYPSTILGR
101: ERAIVVNLEQ IRCIITADEV LLLNSLDNYV WNQDSNELIR RRNNIALEAA CTFLDAQASE LEIEAYPLLD ELTSKISTLN LERVRRLKSR LVALTRRVQK
201: VRDEIEQLMD DDGDMAEMYL TEKKKRMEGS LNGGDHHSLL GYRSNDGLSL SAPVSPVSSP PDSSRRLEKS LSIARSRHDS ARSSESATEN IEELEMLLEA
301: YFVVIDSTLN KLTSLKEYID DTEDFINIQL DNVRNQLIQF ELLLTTATFV VAIFGVVAGI FGMNFEIDFF EKPGAFKWVL TITGVCGLLV FLAFLWFYKR
401: RRLMPL

Best Arabidopsis Sequence Match ( AT1G80900.1 )
(BLAST)

001: MSELKERLLP PRPASAINLR GDAGSRPSPS GRQPLLGVDV LGLKKRGQGL KSWIRVDTSA NSQVIEVDKF TMMRRCDLPA RDLRLLDPLF VYPSTILGRE
101: KAIVVNLEQI RCIITADEVL LLNSLDNYVL RYVVELQQRL KASSVTEVWN QDSLELSRRR SRSLDNVLQN SSPDYLPFEF RALEVALEAA CTFLDSQASE
201: LEIEAYPLLD ELTSKISTLN LERARRLKSR LVALTRRVQK VRDEIEQLMD DDGDMAEMYL TEKKKRMEGS LYGDQSLPVY RTNDCFSLSA PVSPVSSPPE
301: SRRLEKSLSI VRSRHDSARS SEDATENIEE LEMLLEAYFV VIDSTLNKLT SLKEYIDDTE DFINIQLDNV RNQLIQFELL LTTATFVVAI FGVVAGIFGM
401: NFEIDFFEKP GAFKWVLAIT GVCGLVVFLA FLWYYKRRRL MPL

Arabidopsis Description

MRS2-10Magnesium transporter MRS2-10 [Source:UniProtKB/Swiss-Prot;Acc:Q9SAH0]
SUBAcon: [peroxisome,plastid,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.