Subcellular Localization
min:
: max
Winner_takes_all: peroxisome, plastid, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- plastid 3
- cytosol 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY56489 | Canola | cytosol, peroxisome, plastid | 99.21 | 99.21 |
| Bra024309.1-P | Field mustard | cytosol, peroxisome, plastid | 98.94 | 95.41 |
| CDX81228 | Canola | cytosol, mitochondrion, plastid | 90.21 | 92.16 |
| CDY18706 | Canola | cytosol, mitochondrion, plastid | 90.48 | 89.06 |
| Os03t0742400-01 | Rice | plasma membrane | 53.97 | 81.93 |
| CDY46811 | Canola | cytosol | 80.69 | 81.33 |
| AT5G64560.1 | Thale cress | cytosol | 84.39 | 80.96 |
| CDY31314 | Canola | cytosol | 81.22 | 79.95 |
| VIT_05s0020g04720.t01 | Wine grape | cytosol, peroxisome, plasma membrane | 79.37 | 77.12 |
| CDX85800 | Canola | cytosol | 78.04 | 75.84 |
| CDY64845 | Canola | mitochondrion, peroxisome, plastid | 72.75 | 75.14 |
| KRG92427 | Soybean | cytosol, peroxisome, plasma membrane | 78.31 | 74.94 |
| KRH34378 | Soybean | cytosol, peroxisome, plastid | 77.25 | 74.87 |
| CDY64844 | Canola | cytosol | 76.98 | 74.81 |
| EER90897 | Sorghum | cytosol | 76.45 | 74.68 |
| TraesCS5D01G391700.1 | Wheat | plastid | 75.13 | 73.2 |
| HORVU5Hr1G094250.1 | Barley | plastid | 75.13 | 73.2 |
| TraesCS5A01G382400.1 | Wheat | plastid | 74.87 | 72.19 |
| Solyc03g005390.2.1 | Tomato | cytosol, peroxisome, vacuole | 75.13 | 71.9 |
| TraesCS5B01G386300.1 | Wheat | plastid | 72.75 | 70.88 |
| CDX88569 | Canola | cytosol, peroxisome, plasma membrane | 48.68 | 44.88 |
| CDX87352 | Canola | cytosol, peroxisome, plasma membrane | 48.15 | 44.39 |
| CDY35061 | Canola | plastid | 46.83 | 42.14 |
| CDY22292 | Canola | plastid | 44.71 | 41.73 |
| CDY49735 | Canola | mitochondrion, peroxisome, plasma membrane, plastid | 44.71 | 41.63 |
| CDY33361 | Canola | plastid | 44.97 | 40.67 |
| CDX99295 | Canola | cytosol, mitochondrion, nucleus, plastid | 44.71 | 40.33 |
| CDY49260 | Canola | plastid | 45.77 | 40.33 |
| CDY65607 | Canola | plastid | 45.77 | 40.33 |
| CDX92290 | Canola | cytosol, mitochondrion, nucleus, plastid | 44.71 | 40.24 |
| CDY33715 | Canola | cytosol | 39.15 | 39.89 |
| CDY66275 | Canola | cytosol, peroxisome, plasma membrane | 45.24 | 38.78 |
| CDY02984 | Canola | cytosol, peroxisome, plasma membrane | 43.12 | 38.72 |
| CDY36615 | Canola | cytosol, nucleus, peroxisome | 43.12 | 38.72 |
| CDY39718 | Canola | cytosol | 38.62 | 38.62 |
| CDY51207 | Canola | cytosol, nucleus, peroxisome | 42.86 | 38.48 |
| CDX95430 | Canola | cytosol, golgi, peroxisome | 41.53 | 34.51 |
| CDY42196 | Canola | cytosol | 40.74 | 33.77 |
| CDY58861 | Canola | nucleus | 45.5 | 23.56 |
| CDY26960 | Canola | plastid | 23.81 | 19.65 |
| CDX92333 | Canola | plastid | 23.81 | 19.35 |
Protein Annotations
| Gene3D:2.40.128.330 | MapMan:24.3.3.1 | GO:A0A078IMZ4 | UniProt:A0A078IMZ4 | EnsemblPlants:CDY51292 | ProteinID:CDY51292 |
| ProteinID:CDY51292.1 | ncoils:Coil | GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005575 | GO:GO:0006810 |
| GO:GO:0008150 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0030001 | GO:GO:0046873 | GO:GO:0055085 |
| EnsemblPlantsGene:GSBRNA2T00003094001 | InterPro:MgTranspt_CorA/ZnTranspt_ZntB | PFAM:PF01544 | PANTHER:PTHR13890 | PANTHER:PTHR13890:SF8 | SUPFAM:SSF144083 |
| TMHMM:TMhelix | UniParc:UPI0004EF4CC5 | SEG:seg | : | : | : |
Description
BnaA06g23540DBnaA06g23540D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IMZ4]
Coordinates
chrLK032982:+:44443..46786
Molecular Weight (calculated)
42166.0 Da
IEP (calculated)
4.655
GRAVY (calculated)
-0.179
Length
378 amino acids
Sequence
(BLAST)
(BLAST)
001: MSYNNNGNAV AAADPLPGKK TKLQSSRSWV SIVATGESET LDVDKYAIMH RVQIHARDLR ILDPNLSYPS TILGRERAVV LNLEHIKAII TADEVLLRDP
101: SDENVIPVLK ELERRLPSSA ANNDADAAEE DDSPFEFRAL EVFLEAICSF LAARTTELET AAYPALDELT SKISSRNLDR VRKLKSAMTR LTARVQKVRD
201: ELEQLLDDDD DMADLYLSRK LSSASSASSS PNCYLTSPTI GSKISRASRA SLATARGDEN DVEELEMLLE AYFMQIDSTL NRLTTLREYI DDTEDYINIQ
301: LDNHRNQLIQ LELVLSSGTV CSAFYSLVAG IFGMNIPYTW NDNHGYMFKY VVILTGAICV ILFTFIMSHA RYKGLVGS
101: SDENVIPVLK ELERRLPSSA ANNDADAAEE DDSPFEFRAL EVFLEAICSF LAARTTELET AAYPALDELT SKISSRNLDR VRKLKSAMTR LTARVQKVRD
201: ELEQLLDDDD DMADLYLSRK LSSASSASSS PNCYLTSPTI GSKISRASRA SLATARGDEN DVEELEMLLE AYFMQIDSTL NRLTTLREYI DDTEDYINIQ
301: LDNHRNQLIQ LELVLSSGTV CSAFYSLVAG IFGMNIPYTW NDNHGYMFKY VVILTGAICV ILFTFIMSHA RYKGLVGS
001: MSPDGELVPV DSSAVVTAKR KTSQLSRSWI SIDATGQKTV LDVDKHVIMH RVQIHARDLR ILDPNLFYPS AILGRERAIV LNLEHIKAII TAEEVLIRDS
101: SDENVIPVLE EFQRRLPVGN EAHGVHGDGD LGEEDESPFE FRALEVALEA ICSFLAARTT ELEKFAYPAL DELTLKISSR NLERVRKLKS AMTRLTARVQ
201: KVRDELEQLL DDDGDMADLY LTRKLVGASS SVSVSDEPIW YPTSPTIGSM ISRASRVSLV TVRGDDETDV EELEMLLEAY FMQIDSTLNK LTELREYIDD
301: TEDYINIQLD NHRNQLIQLE LMLSAGTVCV SVYSMIAGIF GMNIPNTWNH DHGYIFKWVV SLTGTFCIVL FVIILSYARF RGLIGS
101: SDENVIPVLE EFQRRLPVGN EAHGVHGDGD LGEEDESPFE FRALEVALEA ICSFLAARTT ELEKFAYPAL DELTLKISSR NLERVRKLKS AMTRLTARVQ
201: KVRDELEQLL DDDGDMADLY LTRKLVGASS SVSVSDEPIW YPTSPTIGSM ISRASRVSLV TVRGDDETDV EELEMLLEAY FMQIDSTLNK LTELREYIDD
301: TEDYINIQLD NHRNQLIQLE LMLSAGTVCV SVYSMIAGIF GMNIPNTWNH DHGYIFKWVV SLTGTFCIVL FVIILSYARF RGLIGS
Arabidopsis Description
ATMGT7magnesium transporter 7 [Source:TAIR;Acc:AT5G09690]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.