Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 4
- cytosol 1
- mitochondrion 1
- plasma membrane 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5A01G382400.1 | Wheat | plastid | 99.48 | 98.47 |
| TraesCS5B01G386300.1 | Wheat | plastid | 97.42 | 97.42 |
| HORVU5Hr1G094250.1 | Barley | plastid | 96.39 | 96.39 |
| Os03t0742400-01 | Rice | plasma membrane | 60.82 | 94.78 |
| EER90897 | Sorghum | cytosol | 91.75 | 91.99 |
| Zm00001d033969_P002 | Maize | plasma membrane | 87.37 | 85.61 |
| VIT_05s0020g04720.t01 | Wine grape | cytosol, peroxisome, plasma membrane | 82.73 | 82.52 |
| KRG92427 | Soybean | cytosol, peroxisome, plasma membrane | 81.19 | 79.75 |
| KRH34378 | Soybean | cytosol, peroxisome, plastid | 79.64 | 79.23 |
| CDX81228 | Canola | cytosol, mitochondrion, plastid | 73.97 | 77.57 |
| Solyc03g005390.2.1 | Tomato | cytosol, peroxisome, vacuole | 77.84 | 76.46 |
| Bra037781.1-P | Field mustard | cytosol, mitochondrion, plastid | 75.52 | 76.3 |
| CDY18706 | Canola | cytosol, mitochondrion, plastid | 75.26 | 76.04 |
| AT5G64560.1 | Thale cress | cytosol | 77.06 | 75.89 |
| VIT_07s0141g00590.t01 | Wine grape | cytosol | 75.77 | 75.58 |
| CDY56489 | Canola | cytosol, peroxisome, plastid | 73.45 | 75.4 |
| CDY51292 | Canola | cytosol, peroxisome, plastid | 73.2 | 75.13 |
| Bra031913.1-P | Field mustard | cytosol | 65.98 | 75.07 |
| CDY64845 | Canola | mitochondrion, peroxisome, plastid | 69.85 | 74.04 |
| Bra024309.1-P | Field mustard | cytosol, peroxisome, plastid | 74.74 | 73.98 |
| Bra028621.1-P | Field mustard | cytosol | 73.45 | 73.26 |
| CDX85800 | Canola | cytosol | 73.45 | 73.26 |
| CDY64844 | Canola | cytosol | 72.68 | 72.49 |
| CDY46811 | Canola | cytosol | 69.85 | 72.27 |
| KRG95626 | Soybean | cytosol | 71.39 | 71.39 |
| CDY31314 | Canola | cytosol | 69.85 | 70.57 |
| KRH67301 | Soybean | cytosol | 70.36 | 70.36 |
| Solyc09g065920.2.1 | Tomato | nucleus | 67.27 | 69.23 |
| PGSC0003DMT400038974 | Potato | cytosol | 26.03 | 69.18 |
| AT5G09690.2 | Thale cress | cytosol | 70.36 | 68.77 |
| PGSC0003DMT400038981 | Potato | mitochondrion | 66.75 | 68.7 |
| KRH33492 | Soybean | cytosol | 38.66 | 65.5 |
| AT5G09720.2 | Thale cress | cytosol | 47.16 | 62.24 |
| GSMUA_Achr4P22510_001 | Banana | cytosol, mitochondrion, peroxisome, plastid | 62.63 | 57.72 |
| TraesCS7D01G494700.1 | Wheat | plastid | 46.65 | 40.67 |
| TraesCS2D01G354900.2 | Wheat | cytosol, nucleus, plasma membrane | 43.81 | 39.72 |
| TraesCS3D01G373700.1 | Wheat | mitochondrion | 41.24 | 39.51 |
| TraesCS3D01G373600.1 | Wheat | mitochondrion | 40.46 | 38.57 |
| TraesCS1D01G208700.1 | Wheat | mitochondrion | 45.36 | 37.85 |
| TraesCS3D01G408500.1 | Wheat | mitochondrion | 42.78 | 36.89 |
| TraesCS4D01G025300.1 | Wheat | plastid | 21.39 | 18.57 |
Protein Annotations
| EnsemblPlants:TraesCS5D01G391700.1 | EnsemblPlantsGene:TraesCS5D01G391700 | Gene3D:2.40.128.330 | GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005575 |
| GO:GO:0006810 | GO:GO:0008150 | GO:GO:0016020 | GO:GO:0030001 | GO:GO:0046873 | GO:GO:0055085 |
| InterPro:MgTranspt_CorA/ZnTranspt_ZntB | ncoils:Coil | PANTHER:PTHR13890 | PANTHER:PTHR13890:SF8 | PFAM:PF01544 | SEG:seg |
| SUPFAM:SSF144083 | TIGR:cd12823 | TMHMM:TMhelix | MapMan:24.3.3.1 | : | : |
Description
No Description!
Coordinates
chr5D:-:460170129..460176327
Molecular Weight (calculated)
42766.6 Da
IEP (calculated)
4.608
GRAVY (calculated)
-0.158
Length
388 amino acids
Sequence
(BLAST)
(BLAST)
001: MAAAGGEAAA AALAAAKKRA ASRSWILFDA AGEERELDAD KYAIMHRVDI NARDLRILDP LLSYPSTILG RERAIVLNLE HIKAIVTSEE VLLRDPSDEN
101: VIPVVEELRR RLAPSSAAQH DGKDNLSGQH DAEAAEEDES PFEFRALEVT LEAICSFLDA RTTELETNAY PALDDLTSKI SSHNLDKVRK LKSGMTRLTA
201: RVQKVRDELE QLLDDDDDMA DLYLSRKLAG ASSPVSGSGG PNWFPASPTI GSKISRASRA SAATIHGNEN DVEELEMLLE AYFMQIDGTL NKLTTLREYI
301: DDTEDYINIQ LDNHRNQLIQ LELFLSSGTV CLSLYSLVAG VFGMNIPYTW NDGHGYVFKW VVIVSGLFCA FMFVTIVAYA RHKGLVGS
101: VIPVVEELRR RLAPSSAAQH DGKDNLSGQH DAEAAEEDES PFEFRALEVT LEAICSFLDA RTTELETNAY PALDDLTSKI SSHNLDKVRK LKSGMTRLTA
201: RVQKVRDELE QLLDDDDDMA DLYLSRKLAG ASSPVSGSGG PNWFPASPTI GSKISRASRA SAATIHGNEN DVEELEMLLE AYFMQIDGTL NKLTTLREYI
301: DDTEDYINIQ LDNHRNQLIQ LELFLSSGTV CLSLYSLVAG VFGMNIPYTW NDGHGYVFKW VVIVSGLFCA FMFVTIVAYA RHKGLVGS
001: MAQNGYLVPA DPSAVVTVKK KTPQASWALI DATGQSEPLD VDKYEIMHRV QIHARDLRIL DPNLSYPSTI LGRERAIVLN LEHIKAIITS EEVLLRDPSD
101: ENVIPVVEEL RRRLPVGNAS HNGGQGDGKE IAGAQNDGDT GDEDESPFEF RALEVALEAI CSFLAARTAE LETAAYPALD ELTSKISSRN LDRVRKLKSA
201: MTRLTARVQK VRDELEQLLD DDDDMADLYL SRKLSSASSP ISSIGEPNWY TTSPTIGSKI SRASRASLAT VHGDENDVEE LEMLLEAYFM QIDSTLNRLT
301: TLREYIDDTE DYINIQLDNH RNQLIQLELV LSSGTVCLSM YSLVAGIFGM NIPYTWNDGH GYMFKYVVGL TGTLCVVVFV IIMSYARYKG LVGS
101: ENVIPVVEEL RRRLPVGNAS HNGGQGDGKE IAGAQNDGDT GDEDESPFEF RALEVALEAI CSFLAARTAE LETAAYPALD ELTSKISSRN LDRVRKLKSA
201: MTRLTARVQK VRDELEQLLD DDDDMADLYL SRKLSSASSP ISSIGEPNWY TTSPTIGSKI SRASRASLAT VHGDENDVEE LEMLLEAYFM QIDSTLNRLT
301: TLREYIDDTE DYINIQLDNH RNQLIQLELV LSSGTVCLSM YSLVAGIFGM NIPYTWNDGH GYMFKYVVGL TGTLCVVVFV IIMSYARYKG LVGS
Arabidopsis Description
MRS2-2Magnesium transporter MRS2-2 [Source:UniProtKB/Swiss-Prot;Acc:Q9FLG2]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.