CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
plastid 2
cytosol 2
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH67301	Soybean	cytosol	97.16	97.16
Os03t0742400-01	Rice	plasma membrane	49.48	77.11
VIT_07s0141g00590.t01	Wine grape	cytosol	75.77	75.58
EER90897	Sorghum	cytosol	73.97	74.16
KRH34378	Soybean	cytosol, peroxisome, plastid	73.45	73.08
KRG92427	Soybean	cytosol, peroxisome, plasma membrane	73.71	72.41
HORVU5Hr1G094250.1	Barley	plastid	72.16	72.16
TraesCS5D01G391700.1	Wheat	plastid	71.39	71.39
TraesCS5A01G382400.1	Wheat	plastid	70.88	70.15
TraesCS5B01G386300.1	Wheat	plastid	69.33	69.33
Solyc09g065920.2.1	Tomato	nucleus	66.24	68.17
PGSC0003DMT400038981	Potato	mitochondrion	65.98	67.9
PGSC0003DMT400038974	Potato	cytosol	25.26	67.12
Zm00001d044912_P001	Maize	plastid	15.21	67.05
Zm00001d032490_P001	Maize	cytosol	28.35	62.15
KRH33492	Soybean	cytosol	34.02	57.64
GSMUA_Achr4P22510_001	Banana	cytosol, mitochondrion, peroxisome, plastid	57.47	52.97
KRH77919	Soybean	cytosol	43.56	43.0
KRH59642	Soybean	cytosol	17.78	42.07
KRH27585	Soybean	cytosol	42.53	41.35
KRH23679	Soybean	plastid	46.65	40.86
KRH09638	Soybean	plastid	46.39	40.63
KRH43038	Soybean	plastid	45.36	39.11
KRH59146	Soybean	plastid	45.36	39.02
KRH70907	Soybean	cytosol, nucleus, plasma membrane	41.24	38.65
KRH09687	Soybean	mitochondrion	29.12	36.57
KRH23620	Soybean	mitochondrion	37.11	34.7
KRH40989	Soybean	mitochondrion	35.05	33.09
KRH26555	Soybean	plastid	22.68	19.26
KRH22756	Soybean	mitochondrion, plastid	22.42	19.08

Protein Annotations

EntrezGene:100799368	Gene3D:2.40.128.330	MapMan:24.3.3.1	EMBL:ACUP02012122	ncoils:Coil	EnsemblPlantsGene:GLYMA_19G161600
GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0006810	GO:GO:0008150	GO:GO:0015095
GO:GO:0016020	GO:GO:0016021	GO:GO:1903830	UniProt:I1N9N1	EnsemblPlants:KRG95626	ProteinID:KRG95626
ProteinID:KRG95626.1	PANTHER:PTHR13890	PANTHER:PTHR13890:SF8	TMHMM:TMhelix	UniParc:UPI000233EEA5	SEG:seg

Description

hypothetical protein

Coordinates

chr19:+:42231337..42235175

Molecular Weight (calculated)

43527.1 Da

IEP (calculated)

4.877

GRAVY (calculated)

-0.166

Length

388 amino acids

Sequence
(BLAST)

001: MALAGSVVEL QASSVKKKTA VSRSWILLDH YGKGTVLDAD KYAIMRLVQI HARDLRILDP LLSYPSTILG REKVIVLNLE HIKAIITADE VLLRDPTDDD
101: VVPIVEELRR RLPKVSAAEQ GQGEEEACAQ DGEGGEENEF PFEIRALEVL FEAICSFLDA RTRELETSAY PALDELTSKI SSRNLDRVRK LKCAMTRLTI
201: RVQKIRDELE NLLDDDDDMA DLYLSRKLAA SSSPTSSSDA PYWLYGSPNT GSKRHKSSRA SGTTVQREND VEELEMLLEA YFMQIDGTLN KLATLREYID
301: DTEDYINIQL DNHRNQLIQL ELFISAGTVC MSLYSLVAAI FGMNIPYTWK APGHEHVFKW VVIFGGMVCA SLFLSIVSYA RRKGLVGS

Best Arabidopsis Sequence Match ( AT5G64560.1 )
(BLAST)

001: MAQNGYLVPA DPSAVVTVKK KTPQASWALI DATGQSEPLD VDKYEIMHRV QIHARDLRIL DPNLSYPSTI LGRERAIVLN LEHIKAIITS EEVLLRDPSD
101: ENVIPVVEEL RRRLPVGNAS HNGGQGDGKE IAGAQNDGDT GDEDESPFEF RALEVALEAI CSFLAARTAE LETAAYPALD ELTSKISSRN LDRVRKLKSA
201: MTRLTARVQK VRDELEQLLD DDDDMADLYL SRKLSSASSP ISSIGEPNWY TTSPTIGSKI SRASRASLAT VHGDENDVEE LEMLLEAYFM QIDSTLNRLT
301: TLREYIDDTE DYINIQLDNH RNQLIQLELV LSSGTVCLSM YSLVAGIFGM NIPYTWNDGH GYMFKYVVGL TGTLCVVVFV IIMSYARYKG LVGS

Arabidopsis Description

MRS2-2Magnesium transporter MRS2-2 [Source:UniProtKB/Swiss-Prot;Acc:Q9FLG2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.