Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d044912_P001 | Maize | plastid | 31.51 | 52.27 |
| Zm00001d032490_P001 | Maize | cytosol | 58.22 | 48.02 |
| Os03t0742400-01 | Rice | plasma membrane | 68.49 | 40.16 |
| PGSC0003DMT400038981 | Potato | mitochondrion | 95.89 | 37.14 |
| Solyc09g065920.2.1 | Tomato | nucleus | 93.84 | 36.34 |
| PGSC0003DMT400072765 | Potato | cytosol, peroxisome, plasma membrane | 36.3 | 26.77 |
| EER90897 | Sorghum | cytosol | 69.86 | 26.36 |
| VIT_07s0141g00590.t01 | Wine grape | cytosol | 69.86 | 26.22 |
| HORVU5Hr1G094250.1 | Barley | plastid | 69.18 | 26.03 |
| TraesCS5D01G391700.1 | Wheat | plastid | 69.18 | 26.03 |
| TraesCS5B01G386300.1 | Wheat | plastid | 69.18 | 26.03 |
| TraesCS5A01G382400.1 | Wheat | plastid | 69.18 | 25.77 |
| KRG95626 | Soybean | cytosol | 67.12 | 25.26 |
| KRH67301 | Soybean | cytosol | 66.44 | 25.0 |
| GSMUA_Achr4P22510_001 | Banana | cytosol, mitochondrion, peroxisome, plastid | 54.79 | 19.0 |
| PGSC0003DMT400064171 | Potato | nucleus | 47.26 | 15.97 |
| PGSC0003DMT400073310 | Potato | nucleus, peroxisome, plasma membrane, plastid | 46.58 | 15.28 |
| PGSC0003DMT400066130 | Potato | cytosol, peroxisome, plastid | 44.52 | 13.05 |
| PGSC0003DMT400001226 | Potato | mitochondrion | 19.18 | 7.14 |
Protein Annotations
| EnsemblPlants:PGSC0003DMT400038974 | EnsemblPlantsGene:PGSC0003DMG401015074 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 | PANTHER:PTHR13890 |
| PANTHER:PTHR13890:SF8 | PGSC:PGSC0003DMG401015074 | SEG:seg | TMHMM:TMhelix | UniParc:UPI000295B3A4 | UniProt:M1B7M6 |
| MapMan:24.3.3.1 | : | : | : | : | : |
Description
Metal ion transporter [Source:PGSC_GENE;Acc:PGSC0003DMG401015074]
Coordinates
chr9:+:49077865..49079748
Molecular Weight (calculated)
16294.4 Da
IEP (calculated)
4.285
GRAVY (calculated)
-0.071
Length
146 amino acids
Sequence
(BLAST)
(BLAST)
001: MLVRDDLEQL LEDDGDMADL YLSRKLVAGV SSPLSGQVAP YWSPDTSSIH SKLLSKPSRI CGITHEETDV EELEMLLEAN FVQIESTMNK LTTLREYIDD
101: TEDYINIQLD NHRNQLIQVV ILAGIASASV FLSIITYARH KGLVGS
101: TEDYINIQLD NHRNQLIQVV ILAGIASASV FLSIITYARH KGLVGS
001: MSPDGELVPV DSSAVVTAKR KTSQLSRSWI SIDATGQKTV LDVDKHVIMH RVQIHARDLR ILDPNLFYPS AILGRERAIV LNLEHIKAII TAEEVLIRDS
101: SDENVIPVLE EFQRRLPVGN EAHGVHGDGD LGEEDESPFE FRALEVALEA ICSFLAARTT ELEKFAYPAL DELTLKISSR NLERVRKLKS AMTRLTARVQ
201: KVRDELEQLL DDDGDMADLY LTRKLVGASS SVSVSDEPIW YPTSPTIGSM ISRASRVSLV TVRGDDETDV EELEMLLEAY FMQIDSTLNK LTELREYIDD
301: TEDYINIQLD NHRNQLIQLE LMLSAGTVCV SVYSMIAGIF GMNIPNTWNH DHGYIFKWVV SLTGTFCIVL FVIILSYARF RGLIGS
101: SDENVIPVLE EFQRRLPVGN EAHGVHGDGD LGEEDESPFE FRALEVALEA ICSFLAARTT ELEKFAYPAL DELTLKISSR NLERVRKLKS AMTRLTARVQ
201: KVRDELEQLL DDDGDMADLY LTRKLVGASS SVSVSDEPIW YPTSPTIGSM ISRASRVSLV TVRGDDETDV EELEMLLEAY FMQIDSTLNK LTELREYIDD
301: TEDYINIQLD NHRNQLIQLE LMLSAGTVCV SVYSMIAGIF GMNIPNTWNH DHGYIFKWVV SLTGTFCIVL FVIILSYARF RGLIGS
Arabidopsis Description
ATMGT7magnesium transporter 7 [Source:TAIR;Acc:AT5G09690]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.