CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
plastid 3
cytosol 2
mitochondrion 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRG95626	Soybean	cytosol	97.16	97.16
Os03t0742400-01	Rice	plasma membrane	48.45	75.5
VIT_07s0141g00590.t01	Wine grape	cytosol	74.74	74.55
EER90897	Sorghum	cytosol	72.94	73.13
KRH34378	Soybean	cytosol, peroxisome, plastid	72.42	72.05
KRG92427	Soybean	cytosol, peroxisome, plasma membrane	72.94	71.65
HORVU5Hr1G094250.1	Barley	plastid	71.13	71.13
TraesCS5D01G391700.1	Wheat	plastid	70.36	70.36
TraesCS5A01G382400.1	Wheat	plastid	69.85	69.13
TraesCS5B01G386300.1	Wheat	plastid	68.3	68.3
Solyc09g065920.2.1	Tomato	nucleus	65.72	67.64
PGSC0003DMT400038981	Potato	mitochondrion	65.46	67.37
PGSC0003DMT400038974	Potato	cytosol	25.0	66.44
Zm00001d044912_P001	Maize	plastid	14.69	64.77
Zm00001d032490_P001	Maize	cytosol	27.84	61.02
KRH33492	Soybean	cytosol	32.99	55.9
GSMUA_Achr4P22510_001	Banana	cytosol, mitochondrion, peroxisome, plastid	56.44	52.02
KRH77919	Soybean	cytosol	43.81	43.26
KRH59642	Soybean	cytosol	17.78	42.07
KRH27585	Soybean	cytosol	42.78	41.6
KRH23679	Soybean	plastid	46.39	40.63
KRH09638	Soybean	plastid	46.13	40.41
KRH43038	Soybean	plastid	45.62	39.33
KRH59146	Soybean	plastid	45.36	39.02
KRH70907	Soybean	cytosol, nucleus, plasma membrane	40.98	38.41
KRH09687	Soybean	mitochondrion	28.87	36.25
KRH23620	Soybean	mitochondrion	37.37	34.94
KRH40989	Soybean	mitochondrion	35.05	33.09
KRH26555	Soybean	plastid	23.45	19.91
KRH22756	Soybean	mitochondrion, plastid	23.2	19.74

Protein Annotations

EntrezGene:100812149	Gene3D:2.40.128.330	MapMan:24.3.3.1	EMBL:ACUP02002051	ncoils:Coil	EnsemblPlantsGene:GLYMA_03G159400
GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0006810	GO:GO:0008150	GO:GO:0015095
GO:GO:0016020	GO:GO:0016021	GO:GO:0030001	GO:GO:0046873	GO:GO:0055085	GO:GO:1903830
UniProt:I1JP00	EnsemblPlants:KRH67301	ProteinID:KRH67301	ProteinID:KRH67301.1	InterPro:MgTranspt_CorA/ZnTranspt_ZntB	PFAM:PF01544
PANTHER:PTHR13890	PANTHER:PTHR13890:SF8	TMHMM:TMhelix	UniParc:UPI000233A4B0	SEG:seg	:

Description

hypothetical protein

Coordinates

chr3:+:37457555..37461716

Molecular Weight (calculated)

43669.4 Da

IEP (calculated)

4.873

GRAVY (calculated)

-0.156

Length

388 amino acids

Sequence
(BLAST)

001: MALASSVVEL QPSSVKKKTA VSRSWILLDH YGKGTVLDAD KYAIMRLVQI HARDLRILDP LLSYPSTILG REKVIVLNLE HIKAIITADE VLLRDPMDDD
101: VVPIVEELRR RLPQVSAAEQ GQGKEEACAQ DGEGGEENEF PFEIRALEAL FEAICSFLDA RTRELETSAY PALDELISKI SSRNLDRVRK LKCAMTRLTI
201: RVQKIRDELE SLLDDDDDMA DLYLSRKLDA SSSPTSSSDA PYWLYGSPNT GSKRHKSSRV SGTTVQREND VEELEMLLEA YFMQIDGTLN KLATLREYID
301: DTEDYINIQL DNHRNQLIQL ELFISVGTVC MSLYSLVAAI FGMNIPYTWK APGHEHVFKW VVIFGGMVCA SLFLSIVSYA RRKGLVGS

Best Arabidopsis Sequence Match ( AT5G64560.1 )
(BLAST)

001: MAQNGYLVPA DPSAVVTVKK KTPQASWALI DATGQSEPLD VDKYEIMHRV QIHARDLRIL DPNLSYPSTI LGRERAIVLN LEHIKAIITS EEVLLRDPSD
101: ENVIPVVEEL RRRLPVGNAS HNGGQGDGKE IAGAQNDGDT GDEDESPFEF RALEVALEAI CSFLAARTAE LETAAYPALD ELTSKISSRN LDRVRKLKSA
201: MTRLTARVQK VRDELEQLLD DDDDMADLYL SRKLSSASSP ISSIGEPNWY TTSPTIGSKI SRASRASLAT VHGDENDVEE LEMLLEAYFM QIDSTLNRLT
301: TLREYIDDTE DYINIQLDNH RNQLIQLELV LSSGTVCLSM YSLVAGIFGM NIPYTWNDGH GYMFKYVVGL TGTLCVVVFV IIMSYARYKG LVGS

Arabidopsis Description

MRS2-2Magnesium transporter MRS2-2 [Source:UniProtKB/Swiss-Prot;Acc:Q9FLG2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.