CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

nucleus 2
cytosol 1
mitochondrion 3
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH59642	Soybean	cytosol	33.33	83.54
KRH23620	Soybean	mitochondrion	77.86	77.11
KRH09687	Soybean	mitochondrion	56.45	75.08
VIT_07s0031g02820.t01	Wine grape	cytosol	58.88	54.63
EES04071	Sorghum	mitochondrion	52.55	48.76
GSMUA_Achr5P26100_001	Banana	cytosol	51.82	48.52
KRH77919	Soybean	cytosol	46.23	48.35
Zm00001d042441_P001	Maize	mitochondrion	51.82	48.08
Zm00001d012102_P001	Maize	mitochondrion	51.34	47.63
GSMUA_Achr11P...	Banana	cytosol	51.34	47.52
KRH27585	Soybean	cytosol	45.74	47.12
HORVU3Hr1G092200.1	Barley	mitochondrion	51.34	47.1
TraesCS3B01G448800.1	Wheat	mitochondrion	51.09	46.77
TraesCS3D01G408500.1	Wheat	mitochondrion	51.09	46.67
Os01t0908500-01	Rice	plasma membrane	50.37	46.62
TraesCS3A01G414000.1	Wheat	mitochondrion	50.85	46.34
KXG25477	Sorghum	plastid	39.9	45.68
HORVU3Hr1G082870.5	Barley	mitochondrion	45.01	45.57
TraesCS3A01G380600.1	Wheat	mitochondrion	44.04	44.69
TraesCS3B01G413200.1	Wheat	mitochondrion	44.04	44.69
TraesCS3D01G373700.1	Wheat	mitochondrion	44.04	44.69
TraesCS3D01G373600.1	Wheat	mitochondrion	43.31	43.73
Zm00001d003666_P001	Maize	mitochondrion	42.58	43.42
Os01t0869200-01	Rice	mitochondrion, plastid	43.55	42.82
EES01822	Sorghum	mitochondrion	43.07	42.75
TraesCS3B01G413100.1	Wheat	cytosol, nucleus, plastid, vacuole	42.34	42.75
HORVU3Hr1G082880.2	Barley	cytosol, mitochondrion, peroxisome, vacuole	43.55	42.72
TraesCS3A01G380500.1	Wheat	mitochondrion	42.34	42.65
OQU81611	Sorghum	peroxisome, plasma membrane, plastid	13.14	42.52
EES10822	Sorghum	mitochondrion	43.31	42.28
Zm00001d025416_P001	Maize	mitochondrion	38.69	39.95
Os04t0430900-00	Rice	cytosol, plastid	40.63	39.2
KXG34188	Sorghum	plasma membrane	13.38	37.16
KRH34378	Soybean	cytosol, peroxisome, plastid	34.79	36.67
KRH23679	Soybean	plastid	39.17	36.34
KRG92427	Soybean	cytosol, peroxisome, plasma membrane	34.79	36.2
KRH09638	Soybean	plastid	38.93	36.12
KRH67301	Soybean	cytosol	33.09	35.05
KRG95626	Soybean	cytosol	33.09	35.05
KRH70907	Soybean	cytosol, nucleus, plasma membrane	33.09	32.85
KRH43038	Soybean	plastid	33.58	30.67
KRH33492	Soybean	cytosol	16.79	30.13
KRH59146	Soybean	plastid	32.85	29.93
KRH22756	Soybean	mitochondrion, plastid	20.68	18.64
KRH26555	Soybean	plastid	20.68	18.6

Protein Annotations

Gene3D:1.20.58.340	EntrezGene:100786228	Gene3D:2.40.128.330	MapMan:24.3.3.1	EMBL:ACUP02004743	EnsemblPlantsGene:GLYMA_08G003600
GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0006810	GO:GO:0008150	GO:GO:0015095
GO:GO:0016020	GO:GO:0016021	GO:GO:1903830	UniProt:I1KNY6	EnsemblPlants:KRH40989	ProteinID:KRH40989
ProteinID:KRH40989.1	PANTHER:PTHR13890	PANTHER:PTHR13890:SF9	TMHMM:TMhelix	UniParc:UPI0002948FB9	SEG:seg

Description

hypothetical protein

Coordinates

chr8:-:268826..271412

Molecular Weight (calculated)

46637.0 Da

IEP (calculated)

4.615

GRAVY (calculated)

-0.253

Length

411 amino acids

Sequence
(BLAST)

001: MVRRKTSVGI TTGVKTWMVV SSETGEQRLE DVGKHSLMRR TGLPARDLRV LDPMLSHPSS ILVRERAILV NLEHLKGIIT STEVLMINSS NPFFLLFLQD
101: LLTRLTHQPP SPMSNDMNPG YEAKPPAMCG SEDSSQNVSH VKISEEVKAD SPKMAPIAPK QLPFEFRALE TFIESACRCL ESETSRLEEE AYPALDELTS
201: QLCTLNLERV RHIKSRLVAL SGRVQKVADE LEHLLDDDKD LAEMYLTEKL NASLLDQASL KEEYNSESED TDQSDESNSE KYDKFPGLKL NVEELEMLLE
301: AYFAQTNGIL QRLFSLSEYV DDTEDYINMM LDDKRNELLQ ATIIFNTLNM ILNAGIVVVG LFGMNIQIEL FNGKPRQFWA TTGGTFGGCI LLFFVFFWWG
401: KKKYLLSIDR E

Best Arabidopsis Sequence Match ( AT1G16010.1 )
(BLAST)

001: MSELKERLLP PRPASAMNLR DASVTRPSAS GRPPLLGVDV LGLKKRGQGL RSWIRVDTSG NTQVMEVDKF TMMRRCDLPA RDLRLLDPLF VYPSTILGRE
101: KAIVVNLEQI RCIITADEVL LLNSLDNYVL RYVVELQQRL KTSSVGEMWQ QENSQLSRRR SRSFDNAFEN SSPDYLPFEF RALEIALEAA CTFLDSQASE
201: LEIEAYPLLD ELTSKISTLN LERVRRLKSR LVALTRRVQK VRDEIEQLMD DDGDMAEMYL TEKKRRMEGS MYGDQSLLGY RSNDGLSVSA PVSPVSSPPD
301: SRRLDKSLSI ARSRHDSARS SEGAENIEEL EMLLEAYFVV IDSTLNKLTS LKEYIDDTED FINIQLDNVR NQLIQFELLL TTATFVVAIF GVVAGIFGMN
401: FEIDFFNQPG AFRWVLIITG VCGFVIFSAF VWFFKYRRLM PL

Arabidopsis Description

MRS2-1Magnesium transporter MRS2-1 [Source:UniProtKB/Swiss-Prot;Acc:Q9S9N4]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.