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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion

Predictor Summary:
  • nucleus 1
  • mitochondrion 7
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
HORVU3Hr1G082870.5 Barley mitochondrion 69.08 70.44
TraesCS3B01G413200.1 Wheat mitochondrion 68.84 70.37
TraesCS3D01G373700.1 Wheat mitochondrion 68.36 69.88
TraesCS3A01G380600.1 Wheat mitochondrion 68.36 69.88
TraesCS3D01G373600.1 Wheat mitochondrion 67.87 69.04
TraesCS3B01G413100.1 Wheat cytosol, nucleus, plastid, vacuole 67.63 68.8
TraesCS3A01G380500.1 Wheat mitochondrion 67.39 68.38
Os01t0869200-01 Rice mitochondrion, plastid 68.36 67.7
HORVU3Hr1G082880.2 Barley cytosol, mitochondrion, peroxisome, vacuole 67.87 67.06
KRH59642 Soybean cytosol 22.46 56.71
OQU81611 Sorghum peroxisome, plasma membrane, plastid 17.39 56.69
GSMUA_Achr5P26100_001 Banana cytosol 55.07 51.94
EES04071 Sorghum mitochondrion 54.59 51.02
GSMUA_Achr11P... Banana cytosol 54.11 50.45
KXG34188 Sorghum plasma membrane 17.87 50.0
KXG25477 Sorghum plastid 42.27 48.75
KRH09687 Soybean mitochondrion 35.02 46.93
KRH23620 Soybean mitochondrion 46.86 46.75
VIT_07s0031g02820.t01 Wine grape cytosol 50.0 46.73
EES10822 Sorghum mitochondrion 47.34 46.56
Bra022441.1-P Field mustard cytosol 48.07 45.12
CDY66275 Canola cytosol, peroxisome, plasma membrane 48.07 45.12
KRH40989 Soybean mitochondrion 42.75 43.07
Bra038223.1-P Field mustard cytosol, golgi, peroxisome 46.62 41.96
CDY42196 Canola cytosol 46.14 41.89
CDX95430 Canola cytosol, golgi, peroxisome 45.89 41.76
OQU76793 Sorghum endoplasmic reticulum, peroxisome 35.02 41.67
AT3G19640.1 Thale cress cytosol, golgi, peroxisome, plastid 48.55 41.53
Solyc01g106900.2.1 Tomato cytosol, peroxisome, plastid 49.28 40.96
PGSC0003DMT400066130 Potato cytosol, peroxisome, plastid 49.03 40.76
EER90897 Sorghum cytosol 37.44 40.05
EES11075 Sorghum cytosol, peroxisome, plasma membrane 39.86 37.41
EER91996 Sorghum mitochondrion 34.06 29.5
CDY58861 Canola nucleus 47.83 27.12
OQU93276 Sorghum plastid 28.02 26.85
OQU91190 Sorghum plastid 20.29 18.14
Protein Annotations
Gene3D:1.20.58.340Gene3D:2.40.128.330MapMan:24.3.3.1EntrezGene:8060986UniProt:C5XR82EnsemblPlants:EES01822
ProteinID:EES01822ProteinID:EES01822.1GO:GO:0003674GO:GO:0005215GO:GO:0005575GO:GO:0006810
GO:GO:0008150GO:GO:0015095GO:GO:0015693GO:GO:0016020GO:GO:0016021GO:GO:1903830
PANTHER:PTHR13890PANTHER:PTHR13890:SF12EnsemblPlantsGene:SORBI_3003G369600TMHMM:TMhelixUniParc:UPI0001A84F45RefSeq:XP_002456702.1
SEG:seg:::::
Description
hypothetical protein
Coordinates
chr3:+:68565399..68568244
Molecular Weight (calculated)
46208.3 Da
IEP (calculated)
4.654
GRAVY (calculated)
-0.241
Length
414 amino acids
Sequence
(BLAST)
001: MERKLLPSSV HVTRRKGAAA TRKWLVVQAA AAGEPLVAEL GKHRIMEMTG LPTRDLRVLD PDLDSPSTIL GRERAVVVNL EHVKVIVTAA EALVLDSSNP
101: LLVPFLKSLH ARLSPPDVSS TSSATDRSKE TDQGNGPTVA LCGAGNDNVE TPPFEFKVLE VCLEHTCKCL ETETLTLEKE AYPALDELTS KVSRLKLEHV
201: RNIKNRLVGV SGRVQKVRDE IEHLLDDDMD MAEMYLTRKL TFQGFPETLG SVDSNKDAST DHNENEKEEV DRDDETETVR ESSAYVKPDV EELEMLLEAY
301: FVQIDGTLNK LYHLREYVDD TEDYINIMLD EKQNQLLQMG VLLTTATVVV TAGIVVVSLF GMNIHIELMK DPETDEQARI KNLNFWEATC GTVFGCLAMY
401: LLAIYAGKRS QILH
Best Arabidopsis Sequence Match ( AT3G19640.1 )
(BLAST)
001: MRGARPDEFN FSTNPSTPNT GQPTPTYPAG VGGGGGGRKK GVGVRTWLVL NSSGQSEPKE EGKHSIMRRT GLPARDLRIL DPLLSYPSTV LGRERAIVIN
101: LEHIKAIITA QEVLLLNSKD PSVSPFIDEL QRRILCHHHA TKPQEEQNSG GEPHTRVDPA QGEAGTEQSS GDQGSEAKKD AKQSLENQDG SKVLPFEFVA
201: LEACLEAASS SLEHEALRLE LEAHPALDKL TSKISTLNLE RVRQIKSRLV AITGRVQKVR DELEHLLDDD EDMAEMYLTE KLAQKLEDSS NSSMNESDTF
301: EVDLPQGDED DRLPPEFASE ANRDGRYLQA NDAHELLMST QSALSRNSRG THTSSTRSAM TNKLDVEELE MLLEAYFVQI DGILNKLSTL REYVDDTEDY
401: INIMLDDKQN HLLQMGVMLT TATLVMSAFI AVAGVFGMNI TIELFTDNKH GPSRFIWTVI GGSIGSICLY VGAIGWCKYK RLLE
Arabidopsis Description
MRS2-3MRS2-3 [Source:UniProtKB/TrEMBL;Acc:A0A178VLJ7]
SUBAcon: [peroxisome,golgi,plastid,cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.