Factsheet for TraesCS3B01G413100.1

Subcellular Localization

min:

: max

Winner_takes_all: vacuole, plastid, nucleus, cytosol

Predictor Summary:

plastid 2
nucleus 1
mitochondrion 1
vacuole 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3D01G373600.1	Wheat	mitochondrion	95.33	95.33
TraesCS3A01G380500.1	Wheat	mitochondrion	95.09	94.85
HORVU3Hr1G082880.2	Barley	cytosol, mitochondrion, peroxisome, vacuole	87.72	85.2
TraesCS3B01G413200.1	Wheat	mitochondrion	82.56	82.96
EES01822	Sorghum	mitochondrion	68.8	67.63
Os01t0869200-01	Rice	mitochondrion, plastid	67.08	65.31
KRH59642	Soybean	cytosol	22.36	55.49
GSMUA_Achr5P26100_001	Banana	cytosol	54.55	50.57
TraesCS3B01G448800.1	Wheat	mitochondrion	54.79	49.67
GSMUA_Achr11P...	Banana	cytosol	53.56	49.1
KRH09687	Soybean	mitochondrion	34.64	45.63
KRH23620	Soybean	mitochondrion	46.19	45.3
VIT_07s0031g02820.t01	Wine grape	cytosol	48.4	44.47
CDY66275	Canola	cytosol, peroxisome, plasma membrane	47.17	43.54
Bra022441.1-P	Field mustard	cytosol	47.17	43.54
CDX95430	Canola	cytosol, golgi, peroxisome	47.67	42.64
Bra038223.1-P	Field mustard	cytosol, golgi, peroxisome	47.91	42.39
KRH40989	Soybean	mitochondrion	42.75	42.34
CDY42196	Canola	cytosol	47.17	42.11
AT3G19640.1	Thale cress	cytosol, golgi, peroxisome, plastid	48.4	40.7
TraesCS7B01G414200.1	Wheat	endoplasmic reticulum, plasma membrane	34.4	40.23
PGSC0003DMT400066130	Potato	cytosol, peroxisome, plastid	48.16	39.36
Solyc01g106900.2.1	Tomato	cytosol, peroxisome, plastid	47.91	39.16
TraesCS5B01G386300.1	Wheat	plastid	36.12	37.89
TraesCS2B01G375200.1	Wheat	cytosol, peroxisome, plasma membrane	36.36	34.58
TraesCS1B01G219000.1	Wheat	mitochondrion	32.68	28.42
CDY58861	Canola	nucleus	47.91	26.71
TraesCS4B01G027800.1	Wheat	plastid	20.15	18.3

Protein Annotations

EnsemblPlants:TraesCS3B01G413100.1	EnsemblPlantsGene:TraesCS3B01G413100	Gene3D:1.20.58.340	Gene3D:2.40.128.330	ncoils:Coil	PANTHER:PTHR13890
PANTHER:PTHR13890:SF12	SEG:seg	TIGR:cd12823	TMHMM:TMhelix	MapMan:24.3.3.1	:

Description

No Description!

Coordinates

chr3B:+:650345325..650347433

Molecular Weight (calculated)

45217.2 Da

IEP (calculated)

5.740

GRAVY (calculated)

-0.295

Length

407 amino acids

Sequence
(BLAST)

001: MERRHPQIAP SPPVSRRKAA AAASQEWLVV PAAGERRAGE FGRHRIMEMT GLPARDLRML DPLLAYPSTI LGRDRTIVIN LEHVKAIVTA AEVLVRDPSN
101: PRLRPFLQEL HARLALPDAA TTNPATGSGT CQSPAISGSS KIPPFEFKVL EVCLEHTSKC METETSVLES EAYPALDELT TKVSTSNLDD VRQIKNRLVQ
201: LSGRVQKVRD DIEHLLDDDT DMCEMYLTRK LAFQGVTNES SVNVDSNKHA PPDHGHDHEK EEEDRGGDTA SSHGSSACVK PHVEELEMLL EAYFVEFDGT
301: LNKLCHLRDY VDNTENYINL MLDKKQNQLL QMGVMLTTAT VVVTAGIVVV SLFGMNIHIE LMADPETPEM ARIKNMKFWE TTWGTVAGCA AIYLLAIYAG
401: KKSKYLQ

Best Arabidopsis Sequence Match ( AT1G16010.2 )
(BLAST)

001: MSELKERLLP PRPASAMNLR DASVTRPSAS GRPPLLGVDV LGLKKRGQGL RSWIRVDTSG NTQVMEVDKF TMMRRCDLPA RDLRLLDPLF VYPSTILGRE
101: KAIVVNLEQI RCIITADEVL LLNSLDNYVL RYVVELQQRL KTSSVGEMWQ QENSQLSRRR SRSFDNAFEN SSPDYLPFEF RALEIALEAA CTFLDSQASE
201: LEIEAYPLLD ELTSKISTLN LERVRRLKSR LVALTRRVQK VRDEIEQLMD DDGDMAEMYL TEKKRRMEGS MYGDQSLLGY RSNDGLSVSA PVSPVSSPPD
301: SRRLDKSLSI ARSRHDSARS SEGAENIEEL EMLLEAYFVV IDSTLNKLTS LKEYIDDTED FINIQLDNVR NQLIQFELLL TTATFVVAIF GVVAGIFGMN
401: FEIDFFNQPG AFRWVLIITG VCGFVIFSAF VWFFKYRRLM PL

Arabidopsis Description

MRS2-1Magnesium transporter MRS2-1 [Source:UniProtKB/Swiss-Prot;Acc:Q9S9N4]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.