Factsheet for Bra022441.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 2
plastid 1
mitochondrion 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra003942.1-P
Bra007943.1-P
Bra016187.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G19640.1	Bra003942.1-P	AT1G70780.1	21798944
AT3G19640.1	Bra007943.1-P	AT1G70780.1	21798944
AT3G19640.1	Bra016187.1-P	AT1G70780.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY66275	Canola	cytosol, peroxisome, plasma membrane	99.77	99.77
AT3G19640.1	Thale cress	cytosol, golgi, peroxisome, plastid	87.53	79.75
Bra038223.1-P	Field mustard	cytosol, golgi, peroxisome	79.59	76.3
KRH77919	Soybean	cytosol	63.04	70.74
KRH27585	Soybean	cytosol	61.9	68.42
VIT_03s0091g01190.t01	Wine grape	cytosol	68.93	60.68
Solyc01g106900.2.1	Tomato	cytosol, peroxisome, plastid	68.25	60.44
PGSC0003DMT400066130	Potato	cytosol, peroxisome, plastid	67.8	60.04
CDY58861	Canola	nucleus	97.73	59.04
GSMUA_Achr5P01890_001	Banana	nucleus	58.96	52.53
Zm00001d012102_P001	Maize	mitochondrion	52.61	52.37
OQU81611	Sorghum	peroxisome, plasma membrane, plastid	14.97	51.97
TraesCS3B01G448800.1	Wheat	mitochondrion	52.83	51.89
EES04071	Sorghum	mitochondrion	51.93	51.69
TraesCS3A01G414000.1	Wheat	mitochondrion	52.83	51.66
Os01t0908500-01	Rice	plasma membrane	51.93	51.58
HORVU3Hr1G092200.1	Barley	mitochondrion	52.38	51.56
TraesCS3D01G408500.1	Wheat	mitochondrion	52.61	51.56
Zm00001d042441_P001	Maize	mitochondrion	51.7	51.47
TraesCS3D01G373700.1	Wheat	mitochondrion	45.58	49.63
TraesCS3B01G413200.1	Wheat	mitochondrion	45.58	49.63
TraesCS3A01G380600.1	Wheat	mitochondrion	45.58	49.63
Bra008431.1-P	Field mustard	plasma membrane	41.72	49.6
KXG25477	Sorghum	plastid	40.14	49.3
HORVU3Hr1G082870.5	Barley	mitochondrion	44.9	48.77
EES01822	Sorghum	mitochondrion	45.12	48.07
TraesCS3D01G373600.1	Wheat	mitochondrion	43.54	47.17
TraesCS3B01G413100.1	Wheat	cytosol, nucleus, plastid, vacuole	43.54	47.17
Bra035144.1-P	Field mustard	cytosol, peroxisome, plasma membrane	43.76	47.07
Zm00001d003666_P001	Maize	mitochondrion	42.86	46.9
Os01t0869200-01	Rice	mitochondrion, plastid	44.44	46.89
EES10822	Sorghum	mitochondrion	44.44	46.56
TraesCS3A01G380500.1	Wheat	mitochondrion	42.86	46.32
Bra031913.1-P	Field mustard	cytosol	35.37	45.75
HORVU3Hr1G082880.2	Barley	cytosol, mitochondrion, peroxisome, vacuole	43.31	45.58
KXG34188	Sorghum	plasma membrane	15.19	45.27
Zm00001d025416_P001	Maize	mitochondrion	40.59	44.97
Bra028621.1-P	Field mustard	cytosol	39.46	44.73
Bra037781.1-P	Field mustard	cytosol, mitochondrion, plastid	38.78	44.53
Bra024309.1-P	Field mustard	cytosol, peroxisome, plastid	39.23	44.13
Os04t0430900-00	Rice	cytosol, plastid	42.63	44.13
Bra026085.1-P	Field mustard	plastid	43.31	42.92
Bra025121.1-P	Field mustard	cytosol, nucleus, peroxisome	39.46	41.33
Bra007423.1-P	Field mustard	plastid	35.83	36.83
Bra032683.1-P	Field mustard	plastid	28.57	36.73
Bra022373.1-P	Field mustard	cytosol, mitochondrion, nucleus, plastid	34.69	36.43
Bra002432.1-P	Field mustard	plastid	18.14	17.13

Protein Annotations

EnsemblPlants:Bra022441.1	EnsemblPlants:Bra022441.1-P	EnsemblPlantsGene:Bra022441	Gene3D:1.20.58.340	Gene3D:2.40.128.330	GO:GO:0005575
GO:GO:0016020	GO:GO:0016021	PANTHER:PTHR13890	PANTHER:PTHR13890:SF4	SEG:seg	TMHMM:TMhelix
UniParc:UPI0002547DAE	UniProt:M4E0Z4	MapMan:24.3.3.1	:	:	:

Description

AT3G19640 (E=5e-099) | magnesium transporter CorA-like family protein (MRS2-3)

Coordinates

chrA05:-:17667216..17669189

Molecular Weight (calculated)

49146.7 Da

IEP (calculated)

4.947

GRAVY (calculated)

-0.327

Length

441 amino acids

Sequence
(BLAST)

001: MRGGPRPEDF ETNPSTPITG QPTPTYPAGA RKKGVGVRTW LVLCSRGQAQ TTEVGKHAIM RRTGLPARDL RILDPLLSYP STVLGRERAI VINLEHIKAI
101: ITAQEVLLLN SKDPSVAPFI DELQRRILCH YRATKPKEEE NYEGEMDQAQ GGGDGTPLLF GDEAKKDAKQ SLENQDGSKV LPFEFVALEA CLEAASSSLE
201: SEAVRLELEA HPALDKLTSK ISTLNLERVR QIKSRLVAIT GRVQKVRDEL EHLLDDDEDM AEMYLTEKLP AESASESNRD ESYLRANEDA HDLLMSTHSA
301: LSRTSRGTHT SSTRSAMTNK FDVEELEMLL EAYFVQIDGT LNKLSTLREY VDDTEDYINI MLDDKQNHLL QMGVMLTTAT LVMSAFIAVA GVFGMNITIE
401: LFKDEKAGPT RFAWTVIGGF IGSIFLYVGA IGWWKQKRLL E

Best Arabidopsis Sequence Match ( AT3G19640.1 )
(BLAST)

001: MRGARPDEFN FSTNPSTPNT GQPTPTYPAG VGGGGGGRKK GVGVRTWLVL NSSGQSEPKE EGKHSIMRRT GLPARDLRIL DPLLSYPSTV LGRERAIVIN
101: LEHIKAIITA QEVLLLNSKD PSVSPFIDEL QRRILCHHHA TKPQEEQNSG GEPHTRVDPA QGEAGTEQSS GDQGSEAKKD AKQSLENQDG SKVLPFEFVA
201: LEACLEAASS SLEHEALRLE LEAHPALDKL TSKISTLNLE RVRQIKSRLV AITGRVQKVR DELEHLLDDD EDMAEMYLTE KLAQKLEDSS NSSMNESDTF
301: EVDLPQGDED DRLPPEFASE ANRDGRYLQA NDAHELLMST QSALSRNSRG THTSSTRSAM TNKLDVEELE MLLEAYFVQI DGILNKLSTL REYVDDTEDY
401: INIMLDDKQN HLLQMGVMLT TATLVMSAFI AVAGVFGMNI TIELFTDNKH GPSRFIWTVI GGSIGSICLY VGAIGWCKYK RLLE

Arabidopsis Description

MRS2-3MRS2-3 [Source:UniProtKB/TrEMBL;Acc:A0A178VLJ7]
SUBAcon: [peroxisome,golgi,plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.