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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion

Predictor Summary:
  • plastid 4
  • mitochondrion 6
  • nucleus 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d029808_P001 Maize mitochondrion, plastid 92.89 93.28
Zm00001d047388_P001 Maize mitochondrion, plastid 92.05 92.44
TraesCS1D01G208700.1 Wheat mitochondrion 79.71 81.94
TraesCS1A01G205400.1 Wheat mitochondrion 79.08 81.47
TraesCS1B01G219000.1 Wheat mitochondrion 79.71 81.41
HORVU1Hr1G052760.2 Barley mitochondrion, plastid 79.71 79.54
GSMUA_Achr4P29320_001 Banana cytosol, peroxisome, plasma membrane 55.86 70.45
PGSC0003DMT400064171 Potato nucleus 57.95 64.12
Solyc01g103890.2.1 Tomato nucleus 57.74 63.89
KRH59146 Soybean plastid 59.2 62.75
VIT_12s0034g02550.t01 Wine grape plastid 59.2 62.47
KRH43038 Soybean plastid 58.37 62.0
CDX99295 Canola cytosol, mitochondrion, nucleus, plastid 53.56 61.1
Bra022373.1-P Field mustard cytosol, mitochondrion, nucleus, plastid 53.35 60.71
CDX92290 Canola cytosol, mitochondrion, nucleus, plastid 53.35 60.71
AT3G58970.1 Thale cress mitochondrion, plastid 55.23 60.55
Bra007423.1-P Field mustard plastid 54.18 60.37
CDY49260 Canola plastid 53.97 60.14
CDY65607 Canola plastid 53.97 60.14
OQU93276 Sorghum plastid 49.79 55.09
CDY33715 Canola cytosol 37.45 48.25
AT4G28580.1 Thale cress mitochondrion, plastid 40.8 47.79
CDY39718 Canola cytosol 37.66 47.62
EER90897 Sorghum cytosol 36.19 44.7
Bra032683.1-P Field mustard plastid 31.8 44.31
OQU76793 Sorghum endoplasmic reticulum, peroxisome 29.71 40.8
EES11075 Sorghum cytosol, peroxisome, plasma membrane 32.01 34.69
EES01822 Sorghum mitochondrion 29.5 34.06
KXG25477 Sorghum plastid 25.1 33.43
EES04071 Sorghum mitochondrion 29.5 31.83
OQU81611 Sorghum peroxisome, plasma membrane, plastid 8.37 31.5
EES10822 Sorghum mitochondrion 27.41 31.12
KXG34188 Sorghum plasma membrane 8.58 27.7
OQU91190 Sorghum plastid 16.74 17.28
Protein Annotations
Gene3D:1.20.58.340Gene3D:2.40.128.330MapMan:24.3.3.1EntrezGene:8058788UniProt:C5WTI0ncoils:Coil
EnsemblPlants:EER91996ProteinID:EER91996ProteinID:EER91996.1GO:GO:0003674GO:GO:0005215GO:GO:0005575
GO:GO:0006810GO:GO:0008150GO:GO:0015095GO:GO:0016020GO:GO:0016021GO:GO:1903830
PANTHER:PTHR13890PANTHER:PTHR13890:SF2EnsemblPlantsGene:SORBI_3001G309400unigene:Sbi.21136TMHMM:TMhelixUniParc:UPI0001A825A0
RefSeq:XP_002464998.1SEG:seg::::
Description
hypothetical protein
Coordinates
chr1:+:59477626..59480767
Molecular Weight (calculated)
52387.9 Da
IEP (calculated)
8.461
GRAVY (calculated)
-0.178
Length
478 amino acids
Sequence
(BLAST)
001: MGKRSGGKKL PFFTRSSSSS SSAKRNRSGR RLPSPSKQDN ATRALLASPS AASPSATPGS AAAGQTAQPP PPLSATAGAG GAVPGKVTKK KAGARLWMRL
101: DRWGTSEVVE LDKASIIRRA GLPPRDLRIL GPVFSRSSSI LAREKAMVIN LEFIRVIVTA EEVLLLDPLV HEVLPFVDQL RQHLPLRSLV GGNGECAPDG
201: NGEKQKGSPG GQVPRLNEAT GAEHELPFEF HVLEVALEVV CSSLDLSVAD LERHATPVLD ELTKNVSTRN LERVRSLKSH LTRLLARVQK VRDEIEHLLD
301: DNEDMEHLYL TRKQVQNQQV EALMSSAASN SIVLAGTGVP RLNSSFRRSM SIATSMHLDN DVEDLEMLLE AYFMQLDGIR NRILSVREYI DDTEDYVNIQ
401: LDNQRNELIQ LQLTLTIVSF GIAANTYIAG AFAMNIPTSL YNTDGSLFWP FVGGTSSACF VITVLLFWYA WWKKLLGP
Best Arabidopsis Sequence Match ( AT3G58970.1 )
(BLAST)
001: MGKGPLSFRR LSSIRHRKKG SAVKDDSAQT STPSSPPPPL PIHAGGSAVG ATGKAKKKTG GARLWMRFDR TGAMEVVECD KSTIIKRASV PARDLRILGP
101: VFSHSSNILA REKAIVVNLE VIKAIVTAEE VLLLDPLRPE VLPFVERLKQ QFPQRNGNEN ALQASANVQS PLDPEAAEGL QSELPFEFQV LEIALEVVCS
201: FVDKSVAALE TEAWPVLDEL TKNVSTENLE YVRSLKSNLT RLLARVQKVR DELEHLLDDN EDMADLYLTR KWIQNQQTEA ILAGTASNSI ALPAHNTSNL
301: HRLTSNRSAS MVTSNTEEDD VEDLEMLLEA YFMQLDGMRN KILTVREYID DTEDYVNIQL DNQRNELIQL QLTLTIASFA IAAETLLASL FGMNIPCPLY
401: SIHGVFGYFV WSVTALCIVL FMVTLGYARW KKLLGS
Arabidopsis Description
MRS2-4MRS2-4 [Source:UniProtKB/TrEMBL;Acc:A0A178VB54]
SUBAcon: [mitochondrion,plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.