Factsheet for Solyc11g066660.1.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 4
plasma membrane 2
nucleus 1
mitochondrion 2
golgi 1

Predictors

GFP

MS/MS

Papers

plastid: 22908117
endoplasmic reticulum: 29145071

msms PMID: 22908117 doi

C Barsan, M Zouine, E Maza, W Bian, I Egea, M Rossignol, D Bouyssie, C Pichereaux, E Purgatto, M Bouzayen, A Latché, JC Pech

Université de Toulouse, Institut National Polytechnique-Ecole Nationale Supérieure Agronomique de Toulouse, Génomique et Biotechnologie des Fruits, Castanet-Tolosan F-31326, France.

msms PMID: 29145071 doi

P Ibort, H Imai, M Uemura, R Aroca

Departamento de Microbiología del Suelo y Sistemas Simbióticos, Estación Experimental del Zaidín (EEZ-CSIC), Profesor Albareda 1, 18008 Granada, Spain. Electronic address: pablo.ibort@eez.csic.es., Departamento de Microbiología del Suelo y Sistemas Simbióticos, Estación Experimental del Zaidín (EEZ-CSIC), Profesor Albareda 1, 18008 Granada, Spain. Electronic address: raroca@eez.csic.es., United Graduate School of Agricultural Sciences, Iwate University, Morioka, Iwate 020-8550, Japan; Cryobiofrontier Research Center, Faculty of Agriculture, Iwate University, 3-18-8 Ueda, Morioka, Iwate 020-8550, Japan. Electronic address: u0414004@iwate-u.ac.jp., United Graduate School of Agricultural Sciences, Iwate University, Morioka, Iwate 020-8550, Japan; Cryobiofrontier Research Center, Faculty of Agriculture, Iwate University, 3-18-8 Ueda, Morioka, Iwate 020-8550, Japan. Electronic address: uemura@iwate-u.ac.jp.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400001226	Potato	mitochondrion	80.09	91.33
VIT_06s0061g01060.t01	Wine grape	plastid	70.69	70.85
GSMUA_Achr7P01670_001	Banana	cytosol	23.04	69.13
KRH22756	Soybean	mitochondrion, plastid	67.34	66.01
KRH26555	Soybean	plastid	67.11	65.65
CDY26960	Canola	plastid	67.11	65.5
AT5G22830.1	Thale cress	plastid	66.89	65.14
HORVU4Hr1G004120.2	Barley	plastid	62.86	64.9
CDX92333	Canola	plastid	66.89	64.3
Bra002432.1-P	Field mustard	plastid	66.89	64.03
TraesCS4D01G025300.1	Wheat	plastid	62.86	62.86
TraesCS4A01G286400.1	Wheat	plastid	62.86	62.72
TraesCS4B01G027800.1	Wheat	plastid	62.64	62.5
Os03t0684400-01	Rice	plastid	63.09	59.49
OQU91190	Sorghum	plastid	61.07	58.96
GSMUA_Achr8P03230_001	Banana	mitochondrion	62.64	56.57
Zm00001d033527_P001	Maize	plastid	60.63	53.56
GSMUA_Achr7P01660_001	Banana	plastid	34.0	50.67
Solyc09g065920.2.1	Tomato	nucleus	19.91	23.61
Solyc03g005390.2.1	Tomato	cytosol, peroxisome, vacuole	19.02	21.52
Solyc06g068490.2.1	Tomato	plastid	21.7	21.04
Solyc05g012220.2.1	Tomato	cytosol, peroxisome, plasma membrane	19.02	20.48
Solyc01g103890.2.1	Tomato	nucleus	19.24	19.91
Solyc01g106900.2.1	Tomato	cytosol, peroxisome, plastid	19.69	17.67

Protein Annotations

Gene3D:1.20.58.340	Gene3D:2.40.128.330	MapMan:24.3.3.1	ncoils:Coil	GO:GO:0003674	GO:GO:0005215
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006810	GO:GO:0008150
GO:GO:0009507	GO:GO:0009536	GO:GO:0009628	GO:GO:0009941	GO:GO:0009987	GO:GO:0010027
GO:GO:0010117	GO:GO:0010960	GO:GO:0015095	GO:GO:0016020	GO:GO:0016021	GO:GO:0016043
GO:GO:0030001	GO:GO:0046873	GO:GO:0055085	GO:GO:1903830	UniProt:K4D9S3	InterPro:MgTranspt_CorA/ZnTranspt_ZntB
PFAM:PF01544	PANTHER:PTHR13890	PANTHER:PTHR13890:SF25	SUPFAM:SSF144083	EnsemblPlantsGene:Solyc11g066660.1	EnsemblPlants:Solyc11g066660.1.1
TMHMM:TMhelix	UniParc:UPI0002769FB5	SEG:seg	:	:	:

Description

Magnesium transporter MRS2-11, chloroplastic [Source:Projected from Arabidopsis thaliana (AT5G22830) UniProtKB/Swiss-Prot;Acc:Q058N4]

Coordinates

chr11:-:52429062..52438020

Molecular Weight (calculated)

50366.2 Da

IEP (calculated)

6.092

GRAVY (calculated)

-0.083

Length

447 amino acids

Sequence
(BLAST)

001: MAANALYLLQ LPVRSPEFRF LITGGYAIFR SKMEFPFSRK NHAISLRARK VRVVECVAKS TEMEALMKDG GDDDNDEGDE VRGDDDKVVT HGDSVSSQRS
101: ASASGGDSLS LGIREPVYEV VEVKTCGTVA KRKINRRHLL KSSGLRPRDI RSVDPSLWLT NSMPALLVRE HAILLNLGSL RAIVMQERVL IFNYNRLGGK
201: AFIDSLLPRL NPTSTNGGPS MPFVLEVVEA ALHSRIQRLE HRLWDLEPRV QALLEVLPNR LTADILEELR ISKQKLVELG SRAGALKQML LDILEDTHEI
301: RQICIIGRNC VLKKENDEIE CSVPLDKDIA EEEEEEIEML LENYLQRCES CHGQAERLLD SAKEMEDSIA VNLSSRRLEV SRFELILQVG TFCVAVGALV
401: AGIFGMNLRS YLEEHVFAFW LTTAGIIVGA VLAFYLMYWY LRTRKIL

Best Arabidopsis Sequence Match ( AT5G22830.2 )
(BLAST)

001: MALTPIPSTF TSLFNFSDHS PYPSPSLHYL LPGSSPSFSL QLSALSRTPI YFEALKVLSR SKCFAKSPTT AEDFVGDYES LNVSDDDDGS DSNSSDGDNG
101: GGRDDSKKID SSSSSSSSDS TSLGIREPVY EVVEVKATGA ISTRKINRRQ LLKSSGLRPR DIRSVDPSLF MTNSVPSLLV REHAILLNLG SLRAIAMRDR
201: VLIFDYNRRG GRAFVDTLMP RLNPRSMNGG PSMPFELEAV ESALISRIQR LEQRLMDIEP RVQALLEVLP NRLTADILEE LRISKQRLVE LGSRAGALRQ
301: MLLDLLEDPH EIRRICIMGR NCTLRRGDDD LECTLPSDKL IAEEEEEEIE MLLENYLQRC ESCHGQAERL LDSAKEMEDS IAVNLSSRRL EVSRFELLLQ
401: VGTFCVAVGA LIAGIFGMNL RSYLEEQASA FWLTTGGIII GAAVAFFLMY SYLSRRKIF

Arabidopsis Description

MRS2-11MRS2-11 [Source:UniProtKB/TrEMBL;Acc:A0A178ULQ2]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.