Factsheet for Solyc05g012220.2.1

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, cytosol, plasma membrane

Predictor Summary:

nucleus 2
cytosol 1
plastid 1
mitochondrion 1
plasma membrane 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400072765	Potato	cytosol, peroxisome, plasma membrane	46.02	96.46
VIT_01s0011g00450.t01	Wine grape	cytosol, peroxisome, plasma membrane, plastid	71.57	70.55
Bra025121.1-P	Field mustard	cytosol, nucleus, peroxisome	66.75	65.8
CDY02984	Canola	cytosol, peroxisome, plasma membrane	66.75	65.8
CDY36615	Canola	cytosol, nucleus, peroxisome	66.75	65.8
CDY51207	Canola	cytosol, nucleus, peroxisome	66.75	65.8
KRH70907	Soybean	cytosol, nucleus, plasma membrane	65.3	65.46
AT2G03620.2	Thale cress	cytosol, nucleus, peroxisome	66.27	65.32
GSMUA_Achr11P...	Banana	cytosol, peroxisome, plasma membrane	60.0	60.14
Solyc06g068490.2.1	Tomato	plastid	59.28	53.36
Solyc09g065920.2.1	Tomato	nucleus	37.59	41.38
Solyc03g005390.2.1	Tomato	cytosol, peroxisome, vacuole	36.87	38.73
Solyc01g103890.2.1	Tomato	nucleus	35.18	33.8
Solyc01g106900.2.1	Tomato	cytosol, peroxisome, plastid	40.48	33.73
Solyc11g066660.1.1	Tomato	plastid	20.48	19.02

Protein Annotations

Gene3D:1.20.58.340	Gene3D:2.40.128.330	MapMan:24.3.3.1	ncoils:Coil	GO:GO:0003674	GO:GO:0005215
GO:GO:0005575	GO:GO:0006810	GO:GO:0008150	GO:GO:0015095	GO:GO:0016020	GO:GO:0016021
GO:GO:0030001	GO:GO:0046873	GO:GO:0055085	GO:GO:1903830	UniProt:K4BXU5	InterPro:MgTranspt_CorA/ZnTranspt_ZntB
PFAM:PF01544	PANTHER:PTHR13890	PANTHER:PTHR13890:SF11	SUPFAM:SSF144083	EnsemblPlantsGene:Solyc05g012220.2	EnsemblPlants:Solyc05g012220.2.1
TMHMM:TMhelix	UniParc:UPI0002765686	SEG:seg	:	:	:

Description

Magnesium transporter MRS2-5 [Source:Projected from Arabidopsis thaliana (AT2G03620) UniProtKB/Swiss-Prot;Acc:Q9ZPR4]

Coordinates

chr5:+:5500851..5506199

Molecular Weight (calculated)

46835.3 Da

IEP (calculated)

4.798

GRAVY (calculated)

-0.145

Length

415 amino acids

Sequence
(BLAST)

001: MAEENGPSDF PESTSTRFYS DVQANNNFHG SGLPGIKRRG QGHGSRSWIK IDEHGNSKIL ELDKATVMRH CSLPARDLRL LDPKFIYPST ILGREQAIVV
101: NLEQIRCVIT ADEVILMNSL DACVLQYESE LCKRLQINRD QPDGLPFEFR ALELVLELTC LSLDAQVKEL ELEVYPVLDE LASSINTLNL ERVRRLKGQL
201: LALTQRVQKV CDEIEHLMDD DGDMAEMYLT EKKQRKEDYL NNDSYDQADI YGKIRGAARS APVSPASSTT GMHKLQRAFS NLSSSKHGSI SASSNCQENI
301: DQLEMLLETY FVVIDSALNK LSSLKEYIDD TEDLINIKLA NVQNQLIQFE LLLTAATFVA TIFAMVTAVF GMNLKTTVFD DPDGFNWTII ITGIFCLVLY
401: IAFMIYFKHK KLLPL

Best Arabidopsis Sequence Match ( AT2G03620.2 )
(BLAST)

001: MGEQLDPFSA SNLPDFISSQ KIGRPVNFEG QTNRGHPFSG LKKRGQSSRS WVKIDQDGNS AVLELDKATI MKRCSLPSRD LRLLDPLFIY PSSILGRERA
101: IVVSLEKIRC IITAEEVILM NARDASVVQY QSELCKRLQS NHNLNVKDDL PFEFKALELV LELSCLSLDA QVNELEMEVY PVLDELATNI STLNLEHVRR
201: LKGRLLTLTQ KVQKVCDEIE HLMDDDDDMA EMYLTEKKER AEAHASEELE DNIGEDFESS GIVSKSAPVS PVGSTSGNFG KLQRAFSSIV GSHKSLLSSS
301: SIGENIDQLE MLLEAYFVVV DNTLSKLSSL KEYIDDTEDL INIKLGNVQN QLIQFQLLLT AATFVAAIFA AVTAVFGMNL QDSVFQNPTT FQYVLLITGI
401: GCGFLYFGFV LYFKHKKVFP L

Arabidopsis Description

MRS2-5Magnesium transporter MRS2-5 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZPR4]
SUBAcon: [peroxisome,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.