Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 2
- golgi 1
- cytosol 2
- mitochondrion 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| Bra003986.1-P | |
| Bra004407.1-P | |
| Bra007875.1-P |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT1G52695.1 | Bra003986.1-P | AT1G69690.1 | 21798944 |
| AT1G52695.1 | Bra004407.1-P | AT1G69690.1 | 21798944 |
| AT1G52695.1 | Bra007875.1-P | AT1G69690.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY68953 | Canola | cytosol | 100.0 | 36.41 |
| AT1G52695.1 | Thale cress | cytoskeleton, cytosol, plastid | 62.67 | 20.35 |
| Bra027221.1-P | Field mustard | mitochondrion | 44.0 | 13.31 |
| Bra021124.1-P | Field mustard | plastid | 42.67 | 12.55 |
| Bra030973.1-P | Field mustard | cytosol, mitochondrion, plastid | 42.67 | 12.55 |
| Bra030370.1-P | Field mustard | extracellular | 42.67 | 12.17 |
| Bra001602.1-P | Field mustard | endoplasmic reticulum, extracellular | 41.33 | 11.57 |
| Bra019385.1-P | Field mustard | cytosol | 16.0 | 5.17 |
| Bra019386.1-P | Field mustard | vacuole | 14.67 | 4.23 |
Protein Annotations
| EnsemblPlants:Bra018982.1 | EnsemblPlants:Bra018982.1-P | EnsemblPlantsGene:Bra018982 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 |
| PANTHER:PTHR10655 | PANTHER:PTHR10655:SF55 | SEG:seg | TMHMM:TMhelix | UniParc:UPI000253E895 | UniProt:M4DR39 |
| MapMan:35.2 | : | : | : | : | : |
Description
AT1G52695 (E=5e-013) | phospholipase/carboxylesterase family protein
Coordinates
chrA06:+:901307..901882
Molecular Weight (calculated)
7853.5 Da
IEP (calculated)
4.629
GRAVY (calculated)
0.368
Length
75 amino acids
Sequence
(BLAST)
(BLAST)
1: MQHDFESLDS VNSYVADLLS TEPTNVIKGV GGVGLGAAAA LYFASSCAFG KVQIKQQMIN PQIVIGINGW LPGLT
001: MASGSINVSG LEFGQINTVY PTGIHKATIV WLHDVGNTGF NSLEPLQNLR LPNIKWICPT APRRRVTSLG GEITNAWCDI AKVSENMQDD FGTLNYVNEY
101: ITSLFSNEPQ NVIKGVAGLG LGAAQALYYT SCYAFGWVPI NPQIVIGING WLPGWRRLEY NMNNTNFGTA NRAAASKILI LHGTSDDVVP SSFGYRCADS
201: LRMAGFPTLF KQCGGDHVIN EIRVWLTNLG L
101: ITSLFSNEPQ NVIKGVAGLG LGAAQALYYT SCYAFGWVPI NPQIVIGING WLPGWRRLEY NMNNTNFGTA NRAAASKILI LHGTSDDVVP SSFGYRCADS
201: LRMAGFPTLF KQCGGDHVIN EIRVWLTNLG L
Arabidopsis Description
Alpha/beta-Hydrolases superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q8GY12]
SUBAcon: [plastid,cytoskeleton,cytosol]
SUBAcon: [plastid,cytoskeleton,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.