Factsheet for Bra019385.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 2
plastid 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	plastid
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX94091	Canola	mitochondrion	87.5	84.58
AT4G22305.1	Thale cress	cytosol, plastid	74.14	75.44
GSMUA_Achr1P09700_001	Banana	plastid	59.48	64.19
Bra019386.1-P	Field mustard	vacuole	68.97	61.54
KRH51154	Soybean	cytosol	23.71	59.78
TraesCS2A01G543000.1	Wheat	mitochondrion	55.17	57.92
PGSC0003DMT400034714	Potato	mitochondrion	60.78	55.51
Solyc11g012070.1.1	Tomato	extracellular	60.34	55.12
VIT_00s0612g00010.t01	Wine grape	cytosol	39.66	53.18
TraesCS2D01G544200.1	Wheat	mitochondrion	56.03	49.43
TraesCS2B01G572800.1	Wheat	mitochondrion	56.03	49.43
HORVU2Hr1G122470.1	Barley	mitochondrion	56.03	49.43
Os04t0669500-01	Rice	mitochondrion, vacuole	55.6	48.5
Zm00001d001903_P003	Maize	extracellular, mitochondrion, plastid	49.57	37.95
VIT_00s0515g00010.t01	Wine grape	cytosol	62.5	30.59
Bra030973.1-P	Field mustard	cytosol, mitochondrion, plastid	28.02	25.49
Bra030370.1-P	Field mustard	extracellular	28.45	25.1
Bra021124.1-P	Field mustard	plastid	26.72	24.31
Bra001602.1-P	Field mustard	endoplasmic reticulum, extracellular	27.16	23.51
Bra027221.1-P	Field mustard	mitochondrion	25.0	23.39
Bra018982.1-P	Field mustard	cytosol	5.17	16.0

Protein Annotations

MapMan:26.8.2.6	Gene3D:3.40.50.1820	InterPro:AB_hydrolase	EnsemblPlantsGene:Bra019385	EnsemblPlants:Bra019385.1	EnsemblPlants:Bra019385.1-P
GO:GO:0003674	GO:GO:0003824	GO:GO:0004623	GO:GO:0006629	GO:GO:0006654	GO:GO:0006950
GO:GO:0008150	GO:GO:0008152	GO:GO:0008219	GO:GO:0009058	GO:GO:0009605	GO:GO:0009607
GO:GO:0009814	GO:GO:0009816	GO:GO:0009987	GO:GO:0010363	GO:GO:0016787	GO:GO:0034338
GO:GO:0052689	InterPro:IPR029058	UniProt:M4DS92	PFAM:PF02230	InterPro:PLipase/COase/thioEstase	PANTHER:PTHR10655
PANTHER:PTHR10655:SF20	SUPFAM:SSF53474	UniParc:UPI0002540D8E	SEG:seg	:	:

Description

AT4G22300 (E=1e-088) SOBER1 | SOBER1 (SUPPRESSOR OF AVRBST-ELICITED RESISTANCE 1); carboxylesterase

Coordinates

chrA03:-:24522721..24524089

Molecular Weight (calculated)

25345.0 Da

IEP (calculated)

5.078

GRAVY (calculated)

-0.194

Length

232 amino acids

Sequence
(BLAST)

001: MAKQRYNINC GTQTPWLDDP SSCGFTGLET GPANEHVKTV FKSPELSDAK WLFPSAPYNP VTCNKGRVMP SWFDVPELPF KAGSRIDEAS ILEAVKNVHA
101: IIDEEIARGT RPENVFICGL SQGGALTLAS ALLYPKTLGG GAVLSGWVPF TSSIINQFPE EAKKTPILWS HGTDDELVLF EAGQAALPFL EQAGVTCEFK
201: AYPGLAHWMS NKELQYIESW IKSRMQSSSS SS

Best Arabidopsis Sequence Match ( AT4G22305.1 )
(BLAST)

001: MARTFILWLH GLGDSGPANE PIQTQFKSSE LSNASWLFPS APFNPVTCNN GAVMRSWFDV PELPFKVGSP IDESSVLEAV KNVHAIIDQE IAEGTNPENV
101: FICGLSQGGA LTLASVLLYP KTLGGGAVLS GWVPFTSSII SQFPEEAKKT PILWSHGTDD RMVLFEAGQA ALPFLKEAGV TCEFKAYPGL GHSISNKELK
201: YIESWIKRRL KGSSSTCLQL NCLKEMFH

Arabidopsis Description

SOBER1Carboxylesterase SOBER1 [Source:UniProtKB/Swiss-Prot;Acc:Q84WK4]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.