Factsheet for Zm00001d001903_P003

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plastid, extracellular

Predictor Summary:

plastid 2
extracellular 4
endoplasmic reticulum 3
vacuole 3
plasma membrane 3
golgi 3
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, mitochondrion, plastid
Any Predictor:	mitochondrion, plastid, secretory
ChloroP:	plastid
iPSORT:	secretory
MultiLoc:	mitochondrion
Predotar:	secretory
PProwler:	secretory
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os04t0669500-01	Rice	mitochondrion, vacuole	64.36	73.31
TraesCS2B01G572800.1	Wheat	mitochondrion	62.71	72.24
TraesCS2A01G543000.1	Wheat	mitochondrion	52.48	71.95
TraesCS2D01G544200.1	Wheat	mitochondrion	62.38	71.86
HORVU2Hr1G122470.1	Barley	mitochondrion	61.72	71.1
GSMUA_Achr1P09700_001	Banana	plastid	47.85	67.44
KRH51154	Soybean	cytosol	19.47	64.13
VIT_00s0612g00010.t01	Wine grape	cytosol	33.66	58.96
KRH02000	Soybean	extracellular, golgi	47.52	56.92
AT4G22305.1	Thale cress	cytosol, plastid	41.25	54.82
Solyc11g012070.1.1	Tomato	extracellular	44.55	53.15
PGSC0003DMT400034714	Potato	mitochondrion	44.22	52.76
Bra019386.1-P	Field mustard	vacuole	45.21	52.69
CDX94090	Canola	extracellular, vacuole	45.54	52.67
CDX94091	Canola	mitochondrion	40.59	51.25
AT4G22300.1	Thale cress	golgi	44.22	51.15
Bra019385.1-P	Field mustard	cytosol	37.95	49.57
Zm00001d001902_P001	Maize	cytosol, plastid	33.66	41.8
Zm00001d050270_P001	Maize	mitochondrion	20.79	30.43
VIT_00s0515g00010.t01	Wine grape	cytosol	47.52	30.38
CDX98742	Canola	mitochondrion, vacuole	46.2	28.0
Zm00001d026572_P001	Maize	endoplasmic reticulum, golgi	32.67	27.35
Zm00001d044460_P001	Maize	cytosol	20.79	25.61
Zm00001d009726_P002	Maize	mitochondrion	20.46	24.41
Zm00001d039653_P005	Maize	extracellular	22.11	19.36
Zm00001d008737_P001	Maize	cytosol, plastid	12.54	18.1

Protein Annotations

EnsemblPlants:Zm00001d001903_P003	EnsemblPlants:Zm00001d001903_T003	EnsemblPlantsGene:Zm00001d001903	GO:GO:0003674	GO:GO:0003824	GO:GO:0016787
InterPro:AB_hydrolase	InterPro:IPR029058	InterPro:PLipase/COase/thioEstase	PANTHER:PTHR10655	PANTHER:PTHR10655:SF20	PFAM:PF02230
ProteinID:ONM12362.1	SEG:seg	SUPFAM:SSF53474	TMHMM:TMhelix	UniParc:UPI000842CBF6	UniProt:A0A1D6DU54
MapMan:26.8.2.6	:	:	:	:	:

Description

Carboxylesterase SOBER1

Coordinates

chr2:+:2637043..2639743

Molecular Weight (calculated)

33475.6 Da

IEP (calculated)

8.341

GRAVY (calculated)

-0.031

Length

303 amino acids

Sequence
(BLAST)

001: MSSLIRLLFT LAAAIGAASL LVASLRRRAP PPGLPAKLVP SSHMAGRNRS FVLWLHGLGD SGPANEPIRN LFSAPEFRLA KWSFPSAPRA PVSCNSELPP
101: PYTLLNPCMY NCFKSTFADK ESLSPRTDGF VMPSWFDIHE LPMSAGSPQD ETGVLKAVEK VHAMIDREVA DGIHPENIFV CGFSQGGALT LASVLLYPKK
201: LGGGAVFSGW VPFSSSVTER ISPEARKVIN IFIHLDFTLE MFLHSYHKLR QRYVLLHQLL HQEKPIPIGM AYPDLGHSLS QEELLYLESW IKSRLNASQE
301: KDG

Best Arabidopsis Sequence Match ( AT4G22300.1 )
(BLAST)

001: MRTSRLKKPI VLLTIALLSS VFFFAFFFLN KSDVSSTSAL RNRDSMARTF ILWLHGLGDS GPANEPIKTL FRSQEFRNTK WLFPSAPPNP VSCNYGAVMP
101: SWFDIPELPL TAGSPKDESS LLKAVKNVHA IIDKEIAGGI NPENVYICGF SQGGALTLAS VLLYPKTIGG GAVFSGWIPF NSSITNQFTE DAKKTPILWS
201: HGIDDKTVLF EAGQAALPFL QQAGVTCEFK AYPGLGHSIS NEELQYLESW LKQRMQSSSS SS

Arabidopsis Description

SOBER1Probable carboxylesterase SOBER1-like [Source:UniProtKB/Swiss-Prot;Acc:Q8GYK2]
SUBAcon: [golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.