Factsheet for Bra019386.1-P

Subcellular Localization

min:

: max

Winner_takes_all: vacuole

Predictor Summary:

plastid 2
extracellular 4
endoplasmic reticulum 5
vacuole 6
plasma membrane 4
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	vacuole
Any Predictor:	plastid, secretory
BaCelLo:	plastid
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	plastid
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	vacuole

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
AT4G22300.1	Thale cress	golgi	86.15	85.5
GSMUA_Achr1P09700_001	Banana	plastid	61.54	74.42
TraesCS2A01G543000.1	Wheat	mitochondrion	59.62	70.14
Bra019385.1-P	Field mustard	cytosol	61.54	68.97
PGSC0003DMT400034714	Potato	mitochondrion	66.54	68.11
KRH51154	Soybean	cytosol	23.85	67.39
Solyc11g012070.1.1	Tomato	extracellular	65.77	67.32
TraesCS2D01G544200.1	Wheat	mitochondrion	63.08	62.36
TraesCS2B01G572800.1	Wheat	mitochondrion	62.69	61.98
HORVU2Hr1G122470.1	Barley	mitochondrion	62.31	61.6
VIT_00s0612g00010.t01	Wine grape	cytosol	40.38	60.69
Os04t0669500-01	Rice	mitochondrion, vacuole	60.77	59.4
CDX98742	Canola	mitochondrion, vacuole	97.31	50.6
Zm00001d001903_P003	Maize	extracellular, mitochondrion, plastid	52.69	45.21
VIT_00s0515g00010.t01	Wine grape	cytosol	68.85	37.76
Bra030973.1-P	Field mustard	cytosol, mitochondrion, plastid	26.15	26.67
Bra030370.1-P	Field mustard	extracellular	26.15	25.86
Bra021124.1-P	Field mustard	plastid	25.0	25.49
Bra027221.1-P	Field mustard	mitochondrion	23.85	25.0
Bra001602.1-P	Field mustard	endoplasmic reticulum, extracellular	25.38	24.63
Bra018982.1-P	Field mustard	cytosol	4.23	14.67

Protein Annotations

MapMan:26.8.2.6	Gene3D:3.40.50.1820	InterPro:AB_hydrolase	EnsemblPlantsGene:Bra019386	EnsemblPlants:Bra019386.1	EnsemblPlants:Bra019386.1-P
GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0005623	GO:GO:0005886	GO:GO:0006950
GO:GO:0008150	GO:GO:0008219	GO:GO:0009605	GO:GO:0009607	GO:GO:0009814	GO:GO:0009987
GO:GO:0010363	GO:GO:0016020	GO:GO:0016787	GO:GO:0052689	InterPro:IPR029058	UniProt:M4DS93
PFAM:PF02230	InterPro:PLipase/COase/thioEstase	PANTHER:PTHR10655	PANTHER:PTHR10655:SF20	SUPFAM:SSF53474	TMHMM:TMhelix
UniParc:UPI0002540D8D	SEG:seg	:	:	:	:

Description

AT4G22300 (E=2e-126) SOBER1 | SOBER1 (SUPPRESSOR OF AVRBST-ELICITED RESISTANCE 1); carboxylesterase

Coordinates

chrA03:-:24521073..24522361

Molecular Weight (calculated)

28454.9 Da

IEP (calculated)

5.668

GRAVY (calculated)

-0.010

Length

260 amino acids

Sequence
(BLAST)

001: MRRSTLTKPI VLLSIALLST VLFFAFFFED KPYSSSSQNP DSMARTFILW LHGLGDSGPA NEPIKSLFKS PEFSNTKWLF PSAPPNPVSC NYGMVMPSWF
101: DIRELPLTAG SPNDESSVLE AVKNVHTIID KEIAGGIKPE NVYICGFSQG GALTLASVLL YPKTLGGGAV FSGWVPFNSS VINQFTKDAI KTPILWSHGI
201: DDKTVLFEAG QAALPFLQQA GVTCEFKAYP DLGHSISNEE LQYLESWIKQ RMQTSSSSSS

Best Arabidopsis Sequence Match ( AT4G22300.1 )
(BLAST)

001: MRTSRLKKPI VLLTIALLSS VFFFAFFFLN KSDVSSTSAL RNRDSMARTF ILWLHGLGDS GPANEPIKTL FRSQEFRNTK WLFPSAPPNP VSCNYGAVMP
101: SWFDIPELPL TAGSPKDESS LLKAVKNVHA IIDKEIAGGI NPENVYICGF SQGGALTLAS VLLYPKTIGG GAVFSGWIPF NSSITNQFTE DAKKTPILWS
201: HGIDDKTVLF EAGQAALPFL QQAGVTCEFK AYPGLGHSIS NEELQYLESW LKQRMQSSSS SS

Arabidopsis Description

SOBER1Probable carboxylesterase SOBER1-like [Source:UniProtKB/Swiss-Prot;Acc:Q8GYK2]
SUBAcon: [golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.