Factsheet for TraesCS2B01G572800.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 1
extracellular 3
endoplasmic reticulum 3
vacuole 3
plasma membrane 3
golgi 3
mitochondrion 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion, plastid, secretory
ChloroP:	plastid
iPSORT:	secretory
MultiLoc:	mitochondrion
Predotar:	secretory
PProwler:	secretory
TargetP:	mitochondrion
WoLF PSORT:	mitochondrion
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2D01G544200.1	Wheat	mitochondrion	99.62	99.62
TraesCS2A01G543000.1	Wheat	mitochondrion	83.27	99.09
HORVU2Hr1G122470.1	Barley	mitochondrion	98.1	98.1
Os04t0669500-01	Rice	mitochondrion, vacuole	86.69	85.71
GSMUA_Achr1P09700_001	Banana	plastid	64.26	78.6
AT4G22305.1	Thale cress	cytosol, plastid	55.89	64.47
KRH02000	Soybean	extracellular, golgi	61.22	63.64
Zm00001d001903_P003	Maize	extracellular, mitochondrion, plastid	72.24	62.71
Bra019386.1-P	Field mustard	vacuole	61.98	62.69
PGSC0003DMT400034714	Potato	mitochondrion	60.46	62.6
KRH51154	Soybean	cytosol	21.67	61.96
Solyc11g012070.1.1	Tomato	extracellular	59.32	61.42
VIT_00s0612g00010.t01	Wine grape	cytosol	40.3	61.27
CDX94090	Canola	extracellular, vacuole	60.84	61.07
AT4G22300.1	Thale cress	golgi	59.32	59.54
CDX94091	Canola	mitochondrion	52.09	57.08
Bra019385.1-P	Field mustard	cytosol	49.43	56.03
TraesCS2B01G572900.1	Wheat	plastid	46.39	50.0
TraesCS2B01G573500.1	Wheat	cytosol, nucleus, peroxisome	46.01	48.59
VIT_00s0515g00010.t01	Wine grape	cytosol	62.74	34.81
CDX98742	Canola	mitochondrion, vacuole	62.74	33.0
TraesCS1B01G463000.1	Wheat	cytosol, mitochondrion, nucleus, plastid	25.48	26.38
TraesCS3B01G249600.2	Wheat	mitochondrion	24.33	25.4
TraesCS3B01G193000.1	Wheat	extracellular, peroxisome	12.17	25.2
TraesCS3B01G147000.2	Wheat	plastid	25.48	23.84

Protein Annotations

EnsemblPlants:TraesCS2B01G572800.1	EnsemblPlantsGene:TraesCS2B01G572800	Gene3D:3.40.50.1820	GO:GO:0003674	GO:GO:0003824	GO:GO:0016787
InterPro:AB_hydrolase	InterPro:IPR029058	InterPro:PLipase/COase/thioEstase	PANTHER:PTHR10655	PANTHER:PTHR10655:SF20	PFAM:PF02230
SEG:seg	SUPFAM:SSF53474	TMHMM:TMhelix	MapMan:26.8.2.6	:	:

Description

No Description!

Coordinates

chr2B:-:762503292..762505917

Molecular Weight (calculated)

28190.8 Da

IEP (calculated)

8.512

GRAVY (calculated)

-0.006

Length

263 amino acids

Sequence
(BLAST)

001: MSRRVRFLFS LAAAIAAASL LAASLRRRAQ PPRLPDQLVP GPMAARNRSF VLWLHGLGDS GPANEPIRTF FAAPEFRHTK WAFPSAPNSP VSCNNGAVMP
101: SWFDIHELPL SPGSPQDESG VLKAVENVHA MIDREVAGGI HPDNIFVCGF SQGGALTLAS VLLYPKTLGG GAVFSGWVPF GSSVIERISP EARKTPILWS
201: HGIADQVVLF EAGQAGPPFL QSAGISCEFK AYPDLGHSIA KEELSSLEAW IKGRLKASQD KQS

Best Arabidopsis Sequence Match ( AT4G22300.1 )
(BLAST)

001: MRTSRLKKPI VLLTIALLSS VFFFAFFFLN KSDVSSTSAL RNRDSMARTF ILWLHGLGDS GPANEPIKTL FRSQEFRNTK WLFPSAPPNP VSCNYGAVMP
101: SWFDIPELPL TAGSPKDESS LLKAVKNVHA IIDKEIAGGI NPENVYICGF SQGGALTLAS VLLYPKTIGG GAVFSGWIPF NSSITNQFTE DAKKTPILWS
201: HGIDDKTVLF EAGQAALPFL QQAGVTCEFK AYPGLGHSIS NEELQYLESW LKQRMQSSSS SS

Arabidopsis Description

SOBER1Probable carboxylesterase SOBER1-like [Source:UniProtKB/Swiss-Prot;Acc:Q8GYK2]
SUBAcon: [golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.