Subcellular Localization
min:
: max
Winner_takes_all: peroxisome, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- cytosol 1
- mitochondrion 1
- nucleus 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2D01G544600.1 | Wheat | cytosol | 94.78 | 94.4 |
| TraesCS2A01G543400.1 | Wheat | mitochondrion, plastid | 60.64 | 71.56 |
| Os04t0669700-00 | Rice | mitochondrion | 24.5 | 58.65 |
| HORVU2Hr1G122490.6 | Barley | mitochondrion | 58.23 | 58.23 |
| TraesCS2B01G572900.1 | Wheat | plastid | 47.39 | 48.36 |
| TraesCS2B01G572800.1 | Wheat | mitochondrion | 48.59 | 46.01 |
| Zm00001d026572_P001 | Maize | endoplasmic reticulum, golgi | 59.84 | 41.16 |
| TraesCS1B01G463000.1 | Wheat | cytosol, mitochondrion, nucleus, plastid | 26.1 | 25.59 |
| TraesCS3B01G193000.1 | Wheat | extracellular, peroxisome | 12.45 | 24.41 |
| TraesCS3B01G249600.2 | Wheat | mitochondrion | 24.1 | 23.81 |
| TraesCS3B01G147000.2 | Wheat | plastid | 23.29 | 20.64 |
Protein Annotations
| EnsemblPlants:TraesCS2B01G573500.1 | EnsemblPlantsGene:TraesCS2B01G573500 | Gene3D:3.40.50.1820 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0016787 |
| InterPro:AB_hydrolase | InterPro:IPR029058 | InterPro:PLipase/COase/thioEstase | PANTHER:PTHR10655 | PANTHER:PTHR10655:SF20 | PFAM:PF02230 |
| SEG:seg | SUPFAM:SSF53474 | MapMan:26.8.2.6 | : | : | : |
Description
No Description!
Coordinates
chr2B:-:763445335..763446357
Molecular Weight (calculated)
27054.1 Da
IEP (calculated)
8.130
GRAVY (calculated)
-0.197
Length
249 amino acids
Sequence
(BLAST)
(BLAST)
001: MEEPPPAEPR SQRFVLWLHG LGDSGRANEP VAGYAFAGAR WAFPTAPTAA VRCNRGMLMP SWFDIHDTPI TSKSVRGEAD VLRSVESVHA MIDREISAGT
101: RPEDVFVFGL SQGGALSIAS VLLYPKTLGG CAVFSGFLPF GASFASRVTA EAKKTPVLWV HGRADFLVPI EAGKDGTKFL RGRLGMRCEF KVYDGLGHEL
201: APYELQYCER WADGGGGGSN DDPRTRSVDR GVPRTRRSCS CGFGFFSWS
101: RPEDVFVFGL SQGGALSIAS VLLYPKTLGG CAVFSGFLPF GASFASRVTA EAKKTPVLWV HGRADFLVPI EAGKDGTKFL RGRLGMRCEF KVYDGLGHEL
201: APYELQYCER WADGGGGGSN DDPRTRSVDR GVPRTRRSCS CGFGFFSWS
001: MRTSRLKKPI VLLTIALLSS VFFFAFFFLN KSDVSSTSAL RNRDSMARTF ILWLHGLGDS GPANEPIKTL FRSQEFRNTK WLFPSAPPNP VSCNYGAVMP
101: SWFDIPELPL TAGSPKDESS LLKAVKNVHA IIDKEIAGGI NPENVYICGF SQGGALTLAS VLLYPKTIGG GAVFSGWIPF NSSITNQFTE DAKKTPILWS
201: HGIDDKTVLF EAGQAALPFL QQAGVTCEFK AYPGLGHSIS NEELQYLESW LKQRMQSSSS SS
101: SWFDIPELPL TAGSPKDESS LLKAVKNVHA IIDKEIAGGI NPENVYICGF SQGGALTLAS VLLYPKTIGG GAVFSGWIPF NSSITNQFTE DAKKTPILWS
201: HGIDDKTVLF EAGQAALPFL QQAGVTCEFK AYPGLGHSIS NEELQYLESW LKQRMQSSSS SS
Arabidopsis Description
SOBER1Probable carboxylesterase SOBER1-like [Source:UniProtKB/Swiss-Prot;Acc:Q8GYK2]
SUBAcon: [golgi]
SUBAcon: [golgi]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.