Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- mitochondrion 3
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2B01G573500.1 | Wheat | cytosol, nucleus, peroxisome | 58.23 | 58.23 |
| TraesCS2D01G544600.1 | Wheat | cytosol | 57.43 | 57.2 |
| TraesCS2A01G543400.1 | Wheat | mitochondrion, plastid | 44.58 | 52.61 |
| HORVU2Hr1G122470.1 | Barley | mitochondrion | 30.52 | 28.9 |
| Zm00001d026572_P001 | Maize | endoplasmic reticulum, golgi | 33.73 | 23.2 |
| Os04t0669700-00 | Rice | mitochondrion | 9.24 | 22.12 |
| HORVU6Hr1G043710.1 | Barley | cytosol, extracellular, mitochondrion, plastid | 10.44 | 21.67 |
| HORVU7Hr1G061760.2 | Barley | mitochondrion | 12.05 | 14.22 |
| HORVU1Hr1G093460.5 | Barley | cytosol, plastid | 16.47 | 13.14 |
| HORVU3Hr1G023960.1 | Barley | plastid | 16.47 | 12.46 |
Protein Annotations
| EnsemblPlants:HORVU2Hr1G122490.6 | EnsemblPlantsGene:HORVU2Hr1G122490 | Gene3D:3.40.50.1820 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0016787 |
| InterPro:AB_hydrolase | InterPro:IPR029058 | InterPro:PLipase/COase/thioEstase | PANTHER:PTHR10655 | PANTHER:PTHR10655:SF20 | PFAM:PF02230 |
| SEG:seg | SUPFAM:SSF53474 | UniParc:UPI000B47BC6A | UniProt:A0A287JR57 | MapMan:26.8.2.6 | : |
Description
No Description!
Coordinates
chrchr2H:+:753302876..753303923
Molecular Weight (calculated)
27380.5 Da
IEP (calculated)
10.501
GRAVY (calculated)
-0.610
Length
249 amino acids
Sequence
(BLAST)
(BLAST)
001: RVRLRRRPLG LPHGAHRASY MQPWHADAVV VRHPRHAHHL QIREGRGGRD EGGGERARHD RPRDIRRNEA GGRVRLRAQP GRYPRTTTSS NYSSLCSVVY
101: QQTEDEIACA GALSIASVLL YPRALGGCAV FSGFLPFGAS FASRVTAEAK KTPVLWVHGR ADLLVPIEAG KDGTKFLRGR LGMRCEFKVY EGLGHELAPY
201: ELQYCERWAD GGGGGGGSGD DDPGRRNVDR GVPKSRRSCS CGFGFFSRS
101: QQTEDEIACA GALSIASVLL YPRALGGCAV FSGFLPFGAS FASRVTAEAK KTPVLWVHGR ADLLVPIEAG KDGTKFLRGR LGMRCEFKVY EGLGHELAPY
201: ELQYCERWAD GGGGGGGSGD DDPGRRNVDR GVPKSRRSCS CGFGFFSRS
001: MRTSRLKKPI VLLTIALLSS VFFFAFFFLN KSDVSSTSAL RNRDSMARTF ILWLHGLGDS GPANEPIKTL FRSQEFRNTK WLFPSAPPNP VSCNYGAVMP
101: SWFDIPELPL TAGSPKDESS LLKAVKNVHA IIDKEIAGGI NPENVYICGF SQGGALTLAS VLLYPKTIGG GAVFSGWIPF NSSITNQFTE DAKKTPILWS
201: HGIDDKTVLF EAGQAALPFL QQAGVTCEFK AYPGLGHSIS NEELQYLESW LKQRMQSSSS SS
101: SWFDIPELPL TAGSPKDESS LLKAVKNVHA IIDKEIAGGI NPENVYICGF SQGGALTLAS VLLYPKTIGG GAVFSGWIPF NSSITNQFTE DAKKTPILWS
201: HGIDDKTVLF EAGQAALPFL QQAGVTCEFK AYPGLGHSIS NEELQYLESW LKQRMQSSSS SS
Arabidopsis Description
SOBER1Probable carboxylesterase SOBER1-like [Source:UniProtKB/Swiss-Prot;Acc:Q8GYK2]
SUBAcon: [golgi]
SUBAcon: [golgi]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.