Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, golgi
Predictor Summary:
Predictor Summary:
- extracellular 4
- endoplasmic reticulum 5
- vacuole 4
- plasma membrane 4
- golgi 5
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Os04t0669700-00 | Rice | mitochondrion | 18.78 | 65.38 |
| TraesCS2B01G573500.1 | Wheat | cytosol, nucleus, peroxisome | 41.16 | 59.84 |
| TraesCS2D01G544600.1 | Wheat | cytosol | 40.88 | 59.2 |
| TraesCS2A01G543400.1 | Wheat | mitochondrion, plastid | 28.73 | 49.29 |
| Zm00001d001902_P001 | Maize | cytosol, plastid | 27.35 | 40.57 |
| HORVU2Hr1G122490.6 | Barley | mitochondrion | 23.2 | 33.73 |
| Zm00001d001903_P003 | Maize | extracellular, mitochondrion, plastid | 27.35 | 32.67 |
| Zm00001d050270_P001 | Maize | mitochondrion | 15.75 | 27.54 |
| Zm00001d009726_P002 | Maize | mitochondrion | 14.64 | 20.87 |
| Zm00001d044460_P001 | Maize | cytosol | 13.81 | 20.33 |
| Zm00001d039653_P005 | Maize | extracellular | 16.3 | 17.05 |
| Zm00001d008737_P001 | Maize | cytosol, plastid | 8.56 | 14.76 |
Protein Annotations
| EnsemblPlants:Zm00001d026572_P001 | EnsemblPlants:Zm00001d026572_T001 | EnsemblPlantsGene:Zm00001d026572 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0016787 |
| InterPro:AB_hydrolase | InterPro:IPR029058 | InterPro:PLipase/COase/thioEstase | PANTHER:PTHR10655 | PANTHER:PTHR10655:SF20 | PFAM:PF02230 |
| ProteinID:AQK47105.1 | SEG:seg | SignalP:SignalP-noTM | SUPFAM:SSF53474 | UniParc:UPI00084561E1 | UniProt:A0A1D6JHK5 |
| MapMan:26.8.2.6 | : | : | : | : | : |
Description
Carboxylesterase SOBER1
Coordinates
chr10:-:148200915..148202755
Molecular Weight (calculated)
39199.9 Da
IEP (calculated)
11.364
GRAVY (calculated)
-0.198
Length
362 amino acids
Sequence
(BLAST)
(BLAST)
001: MEKSIAIFCL LSIASLKVKV LRRGGVVVSV PELRPRRMEE ERPPAAGSGA GTGRVRRGGF VVWLHGLGDC GRANEFIADH FSAAALSDAR WAFPTAPTAP
101: VTCNRGMRMP SWFDIHDAPI TSVSQNRPVA SLLPCAASSL LLPCVCVRAC VKRSVRGEED VLRAVQIVHT MIDREIASGT GPEDVFVFGL SQGGALSIAS
201: VLLYPKTLGG CAVFSGFLPF DSSSSSSFAA RVTDEAKKTP VLWIHGGADS LIPVQEGWKG ETGSSSCGDS AWHASSRNTT GSATLWRRTN WSTASGGRRR
301: PFWEWERTNT DEDKARGRRR RRVAVRGRGR GRGARASRCS AGSSISSPDS RRRRRLFLFL LL
101: VTCNRGMRMP SWFDIHDAPI TSVSQNRPVA SLLPCAASSL LLPCVCVRAC VKRSVRGEED VLRAVQIVHT MIDREIASGT GPEDVFVFGL SQGGALSIAS
201: VLLYPKTLGG CAVFSGFLPF DSSSSSSFAA RVTDEAKKTP VLWIHGGADS LIPVQEGWKG ETGSSSCGDS AWHASSRNTT GSATLWRRTN WSTASGGRRR
301: PFWEWERTNT DEDKARGRRR RRVAVRGRGR GRGARASRCS AGSSISSPDS RRRRRLFLFL LL
001: MRTSRLKKPI VLLTIALLSS VFFFAFFFLN KSDVSSTSAL RNRDSMARTF ILWLHGLGDS GPANEPIKTL FRSQEFRNTK WLFPSAPPNP VSCNYGAVMP
101: SWFDIPELPL TAGSPKDESS LLKAVKNVHA IIDKEIAGGI NPENVYICGF SQGGALTLAS VLLYPKTIGG GAVFSGWIPF NSSITNQFTE DAKKTPILWS
201: HGIDDKTVLF EAGQAALPFL QQAGVTCEFK AYPGLGHSIS NEELQYLESW LKQRMQSSSS SS
101: SWFDIPELPL TAGSPKDESS LLKAVKNVHA IIDKEIAGGI NPENVYICGF SQGGALTLAS VLLYPKTIGG GAVFSGWIPF NSSITNQFTE DAKKTPILWS
201: HGIDDKTVLF EAGQAALPFL QQAGVTCEFK AYPGLGHSIS NEELQYLESW LKQRMQSSSS SS
Arabidopsis Description
SOBER1Probable carboxylesterase SOBER1-like [Source:UniProtKB/Swiss-Prot;Acc:Q8GYK2]
SUBAcon: [golgi]
SUBAcon: [golgi]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.