Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- mitochondrion 4
- nucleus 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d001902_P001 | Maize | cytosol, plastid | 38.65 | 32.79 |
| Zm00001d001903_P003 | Maize | extracellular, mitochondrion, plastid | 30.43 | 20.79 |
| Zm00001d026572_P001 | Maize | endoplasmic reticulum, golgi | 27.54 | 15.75 |
| Zm00001d044460_P001 | Maize | cytosol | 17.39 | 14.63 |
| Zm00001d009726_P002 | Maize | mitochondrion | 15.94 | 12.99 |
| Zm00001d039653_P005 | Maize | extracellular | 16.43 | 9.83 |
| Zm00001d008737_P001 | Maize | cytosol, plastid | 7.25 | 7.14 |
Protein Annotations
| EnsemblPlants:Zm00001d050270_P001 | EnsemblPlants:Zm00001d050270_T001 | EnsemblPlantsGene:Zm00001d050270 | Gene3D:3.40.50.1820 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0016787 | InterPro:AB_hydrolase | InterPro:IPR029058 | InterPro:PLipase/COase/thioEstase | PANTHER:PTHR10655 | PANTHER:PTHR10655:SF30 |
| PFAM:PF02230 | ProteinID:AQK52227.1 | SUPFAM:SSF53474 | UniParc:UPI00084410C1 | UniProt:A0A1D6Q0Q9 | MapMan:26.8.2.6 |
Description
Carboxylesterase SOBER1
Coordinates
chr4:-:77517801..77532919
Molecular Weight (calculated)
23035.0 Da
IEP (calculated)
9.551
GRAVY (calculated)
-0.221
Length
207 amino acids
Sequence
(BLAST)
(BLAST)
001: MMDRQDALRS PRLLLAVWRV AGNPHRYTDG TTYNRFCIIV KTIRDEKEVL KAIEYVHELL DKEVAAETSP TDILVCGMSQ GGALAKASVL LYPKTLGGCA
101: IFNGSVPISK SFAQKVPSES RKTSIMVSWN GSTRTKPLPD QKALEIIFEK IQRKDTYGVF VEAVDPVEIY KKEKIIVSPI VSMPASSKVP EKIEWNSNFG
201: GRKSVET
101: IFNGSVPISK SFAQKVPSES RKTSIMVSWN GSTRTKPLPD QKALEIIFEK IQRKDTYGVF VEAVDPVEIY KKEKIIVSPI VSMPASSKVP EKIEWNSNFG
201: GRKSVET
001: MARTFILWLH GLGDSGPANE PIQTQFKSSE LSNASWLFPS APFNPVTCNN GAVMRSWFDV PELPFKVGSP IDESSVLEAV KNVHAIIDQE IAEGTNPENV
101: FICGLSQGGA LTLASVLLYP KTLGGGAVLS GWVPFTSSII SQFPEEAKKT PILWSHGTDD RMVLFEAGQA ALPFLKEAGV TCEFKAYPGL GHSISNKELK
201: YIESWIKRRL KGSSSTCLQL NCLKEMFH
101: FICGLSQGGA LTLASVLLYP KTLGGGAVLS GWVPFTSSII SQFPEEAKKT PILWSHGTDD RMVLFEAGQA ALPFLKEAGV TCEFKAYPGL GHSISNKELK
201: YIESWIKRRL KGSSSTCLQL NCLKEMFH
Arabidopsis Description
SOBER1Carboxylesterase SOBER1 [Source:UniProtKB/Swiss-Prot;Acc:Q84WK4]
SUBAcon: [plastid,cytosol]
SUBAcon: [plastid,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.