Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- cytosol 1
- mitochondrion 3
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3A01G219200.1 | Wheat | mitochondrion | 98.02 | 99.2 |
| TraesCS3D01G233300.1 | Wheat | mitochondrion | 98.41 | 98.41 |
| KXG32884 | Sorghum | plastid | 79.37 | 80.32 |
| Zm00001d044460_P001 | Maize | cytosol | 77.78 | 79.67 |
| TraesCS1B01G463000.1 | Wheat | cytosol, mitochondrion, nucleus, plastid | 78.97 | 78.35 |
| Os01t0612500-01 | Rice | plastid | 75.0 | 77.78 |
| GSMUA_Achr6P01610_001 | Banana | plastid | 73.41 | 71.71 |
| Solyc06g067950.2.1 | Tomato | plastid | 66.67 | 65.62 |
| PGSC0003DMT400073482 | Potato | plastid | 66.67 | 65.62 |
| GSMUA_Achr6P01540_001 | Banana | mitochondrion | 69.84 | 64.71 |
| Bra027221.1-P | Field mustard | mitochondrion | 63.1 | 64.11 |
| KRH23541 | Soybean | cytosol, mitochondrion, plastid | 65.08 | 64.06 |
| Solyc12g042890.1.1 | Tomato | cytosol, nucleus, plastid | 65.08 | 63.81 |
| PGSC0003DMT400073687 | Potato | cytosol, nucleus, plastid | 65.08 | 63.81 |
| CDY21856 | Canola | plastid | 63.49 | 62.75 |
| CDY20140 | Canola | mitochondrion, plastid | 63.49 | 62.75 |
| CDX97691 | Canola | plastid | 63.49 | 62.75 |
| Bra021124.1-P | Field mustard | plastid | 63.49 | 62.75 |
| KRH44416 | Soybean | mitochondrion | 63.49 | 62.5 |
| CDY58459 | Canola | plastid | 63.1 | 62.35 |
| CDY72010 | Canola | mitochondrion | 49.21 | 62.31 |
| AT1G52700.2 | Thale cress | cytosol, mitochondrion, nucleus, plastid | 62.7 | 61.96 |
| CDY30093 | Canola | plastid | 62.7 | 61.96 |
| CDY60557 | Canola | plastid | 61.51 | 60.78 |
| CDY02538 | Canola | mitochondrion | 61.51 | 60.78 |
| Bra030973.1-P | Field mustard | cytosol, mitochondrion, plastid | 61.51 | 60.78 |
| Bra001602.1-P | Field mustard | endoplasmic reticulum, extracellular | 63.89 | 60.07 |
| CDX75839 | Canola | plasma membrane | 62.7 | 58.96 |
| VIT_09s0002g06010.t01 | Wine grape | extracellular | 68.25 | 58.9 |
| AT3G15650.2 | Thale cress | plastid | 63.89 | 58.76 |
| Bra030370.1-P | Field mustard | extracellular | 60.71 | 58.17 |
| KRH47496 | Soybean | plastid | 61.9 | 57.56 |
| KRH09772 | Soybean | plastid | 64.29 | 55.48 |
| TraesCS3B01G147000.2 | Wheat | plastid | 59.13 | 53.02 |
| CDY62011 | Canola | endoplasmic reticulum, plasma membrane | 61.11 | 52.56 |
| TraesCS3B01G193000.1 | Wheat | extracellular, peroxisome | 26.19 | 51.97 |
| CDY28985 | Canola | extracellular | 18.25 | 42.99 |
| TraesCS2B01G572900.1 | Wheat | plastid | 24.6 | 25.41 |
| TraesCS2B01G572800.1 | Wheat | mitochondrion | 25.4 | 24.33 |
| TraesCS2B01G573500.1 | Wheat | cytosol, nucleus, peroxisome | 23.81 | 24.1 |
Protein Annotations
| EnsemblPlants:TraesCS3B01G249600.2 | EnsemblPlantsGene:TraesCS3B01G249600 | Gene3D:3.40.50.1820 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0016787 |
| InterPro:AB_hydrolase | InterPro:IPR029058 | InterPro:PLipase/COase/thioEstase | PANTHER:PTHR10655 | PANTHER:PTHR10655:SF54 | PFAM:PF02230 |
| SUPFAM:SSF53474 | MapMan:35.1 | : | : | : | : |
Description
No Description!
Coordinates
chr3B:+:397674956..397677099
Molecular Weight (calculated)
27192.2 Da
IEP (calculated)
8.374
GRAVY (calculated)
-0.181
Length
252 amino acids
Sequence
(BLAST)
(BLAST)
001: MSSSGTYCAR GVRREYGRTY VVRPKGRHLA TIVWLHGIGD NGNSWSQVLG NLPLDNVKWI CPTAPTRPVA AFGGFPCTAW FDVEETSVDG PDDVQGLDAS
101: AAHIANLLSS EPSDVRLGIG GFSMGAATAL HSAACYGHGR FSNGVAYPIT LSAIIGLSGW LPCSRTLRTK IESSQTAFRR AAALPIMLGH GRGDEVVTYR
201: NGERSAEFLR NSGFSYLNFK AYNGLGHHTI PEEMDDVSKW LRARLGLDRS CG
101: AAHIANLLSS EPSDVRLGIG GFSMGAATAL HSAACYGHGR FSNGVAYPIT LSAIIGLSGW LPCSRTLRTK IESSQTAFRR AAALPIMLGH GRGDEVVTYR
201: NGERSAEFLR NSGFSYLNFK AYNGLGHHTI PEEMDDVSKW LRARLGLDRS CG
001: MSYSHQSMGS GSRNARGYEF GRTYVVRPKG KHQATLVWLH GLGDNGSSSS QLMDSLHLPN IKWICPTAPS RPVTSLGGFT CTAWFDVGEI SEDGHDDLEG
101: LDASASHIAN LLSSEPADVK VGIGGFSMGA AISLYSATCY ALGRYGTGHA YPINLQAVVG LSGWLPGWKS LRSKIECSFE AARRAASLPI ILTHGTSDDV
201: VPYRFGEKSA QSLGMAGFRL AMFKPYEGLG HYTVPREMDE VVHWLTTMLG LEGSR
101: LDASASHIAN LLSSEPADVK VGIGGFSMGA AISLYSATCY ALGRYGTGHA YPINLQAVVG LSGWLPGWKS LRSKIECSFE AARRAASLPI ILTHGTSDDV
201: VPYRFGEKSA QSLGMAGFRL AMFKPYEGLG HYTVPREMDE VVHWLTTMLG LEGSR
Arabidopsis Description
Alpha/beta-Hydrolases superfamily protein [Source:UniProtKB/TrEMBL;Acc:A0A1P8AQT5]
SUBAcon: [mitochondrion,plastid,nucleus,cytosol]
SUBAcon: [mitochondrion,plastid,nucleus,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.