Factsheet for PGSC0003DMT400073482

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 4
mitochondrion 3
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc06g067950.2.1	Tomato	plastid	99.61	99.61
PGSC0003DMT400073687	Potato	cytosol, nucleus, plastid	88.28	87.94
KRH23541	Soybean	cytosol, mitochondrion, plastid	79.3	79.3
KRH44416	Soybean	mitochondrion	77.34	77.34
CDY72010	Canola	mitochondrion	58.98	75.88
Bra027221.1-P	Field mustard	mitochondrion	71.88	74.19
Bra021124.1-P	Field mustard	plastid	73.83	74.12
CDY20140	Canola	mitochondrion, plastid	73.44	73.73
Bra030973.1-P	Field mustard	cytosol, mitochondrion, plastid	73.05	73.33
CDX97691	Canola	plastid	73.05	73.33
VIT_09s0002g06010.t01	Wine grape	extracellular	83.59	73.29
CDY02538	Canola	mitochondrion	72.66	72.94
CDY21856	Canola	plastid	72.66	72.94
CDY30093	Canola	plastid	72.66	72.94
CDY58459	Canola	plastid	72.66	72.94
AT1G52700.2	Thale cress	cytosol, mitochondrion, nucleus, plastid	72.27	72.55
CDY60557	Canola	plastid	72.27	72.55
KRH47496	Soybean	plastid	75.39	71.22
GSMUA_Achr6P01610_001	Banana	plastid	71.48	70.93
KRH09772	Soybean	plastid	79.69	69.86
TraesCS1A01G428100.1	Wheat	plastid	69.14	69.69
PGSC0003DMT400083903	Potato	plastid	69.14	69.41
Bra001602.1-P	Field mustard	endoplasmic reticulum, extracellular	72.66	69.4
TraesCS1B01G463000.1	Wheat	cytosol, mitochondrion, nucleus, plastid	68.75	69.29
TraesCS1D01G437600.1	Wheat	plastid	68.75	69.29
AT3G15650.2	Thale cress	plastid	73.83	68.98
KXG32884	Sorghum	plastid	66.8	68.67
CDX75839	Canola	plasma membrane	71.88	68.66
Bra030370.1-P	Field mustard	extracellular	70.31	68.44
Os04t0174900-01	Rice	plastid	67.58	68.11
Zm00001d009726_P002	Maize	mitochondrion	67.58	68.11
Zm00001d044460_P001	Maize	cytosol	65.23	67.89
TraesCS3A01G219200.1	Wheat	mitochondrion	66.02	67.87
OQU78517	Sorghum	mitochondrion	67.19	67.72
TraesCS3B01G249600.2	Wheat	mitochondrion	65.62	66.67
TraesCS3D01G233300.1	Wheat	mitochondrion	65.62	66.67
Os01t0612500-01	Rice	plastid	62.11	65.43
GSMUA_Achr6P01540_001	Banana	mitochondrion	68.75	64.71
CDY62011	Canola	endoplasmic reticulum, plasma membrane	72.27	63.14
HORVU6Hr1G043710.1	Barley	cytosol, extracellular, mitochondrion, plastid	26.56	56.67
HORVU1Hr1G093460.5	Barley	cytosol, plastid	64.45	52.88
Os05t0588100-00	Rice	cytosol	58.59	52.82
HORVU7Hr1G061760.2	Barley	mitochondrion	37.11	45.02
TraesCS3B01G193000.1	Wheat	extracellular, peroxisome	22.27	44.88
PGSC0003DMT400034714	Potato	mitochondrion	25.39	25.59

Protein Annotations

EnsemblPlants:PGSC0003DMT400073482	EnsemblPlantsGene:PGSC0003DMG400028544	EntrezGene:102590910	Gene3D:3.40.50.1820	GO:GO:0003674	GO:GO:0003824
GO:GO:0016787	InterPro:AB_hydrolase	InterPro:IPR029058	InterPro:PLipase/COase/thioEstase	MEROPS:S09.A56	PANTHER:PTHR10655
PANTHER:PTHR10655:SF34	PFAM:PF02230	PGSC:PGSC0003DMG400028544	RefSeq:XP_006356194.1	SEG:seg	SUPFAM:SSF53474
UniParc:UPI0002951993	UniProt:M1CS39	MapMan:35.1	:	:	:

Description

Acyl-protein thioesterase [Source:PGSC_GENE;Acc:PGSC0003DMG400028544]

Coordinates

chr6:+:49693375..49696372

Molecular Weight (calculated)

27693.0 Da

IEP (calculated)

7.764

GRAVY (calculated)

-0.135

Length

256 amino acids

Sequence
(BLAST)

001: MSYLNPSTGS GSRTSRMTFE FGRTYVVRPK GKHQATIVWL HGLGDNGSSW SQLLESLPLP NIKWICPTAP TRPVAILGGF PCTAWFDVGE LSDDGPDDFE
101: GLDASVAHIA NLLSTEPADV KLGIGGFSMG AATALYSATC FAQGKYGNGN TYPVNLRAII GLSGWLPGSR NVRNKIEGSL EAARRASSLP ILLCHGSCDE
201: VVPYKYGERS TLVLNSAGFR NLAFKKYDGL GHYTVPREMD EVCNWLNARL VLEGCR

Best Arabidopsis Sequence Match ( AT1G52700.2 )
(BLAST)

001: MSYSHQSMGS GSRNARGYEF GRTYVVRPKG KHQATLVWLH GLGDNGSSSS QLMDSLHLPN IKWICPTAPS RPVTSLGGFT CTAWFDVGEI SEDGHDDLEG
101: LDASASHIAN LLSSEPADVK VGIGGFSMGA AISLYSATCY ALGRYGTGHA YPINLQAVVG LSGWLPGWKS LRSKIECSFE AARRAASLPI ILTHGTSDDV
201: VPYRFGEKSA QSLGMAGFRL AMFKPYEGLG HYTVPREMDE VVHWLTTMLG LEGSR

Arabidopsis Description

Alpha/beta-Hydrolases superfamily protein [Source:UniProtKB/TrEMBL;Acc:A0A1P8AQT5]
SUBAcon: [mitochondrion,plastid,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.